EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12501 contig Csv1_Contig12501:1252..1976. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PSYIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Psychromonas ingrahamii (strain 37) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M ++E+ E+   AI S ++  +  N PN DMVGHTG  +A V AC+A D  V  ++ A+++V G  L+TADHGNAE M+     G          + T+HT  PVP    G          A++ +GG L ++A T +NL   E P++
Sbjct:  363 TYDMQPEMSSIELTEKLVSAIKSTKYDVIICNYPNGDMVGHTGVYDAAVKACEAVDSCVGKVVAALKEVDGECLITADHGNAEQMIDPVTGG----------IHTAHTNLPVPFIYVGR--------NAEMASGGRLCDIAPTMLNLMDMEIPAE 499          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ECOLC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     NVK  A    G L+++A T ++L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVG---DKNVKAVA---GGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ECOHS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O9:H4 (strain HS) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     NVK  A    G L+++A T ++L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVG---DKNVKAVA---GGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ECO57 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O157:H7 GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     NVK  A    G L+++A T ++L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVG---DKNVKAVA---GGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ECO24 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     NVK  A    G L+++A T ++L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVG---DKNVKAVA---GGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI2_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + I S ++  + +N  N DMVGHTG  EA V A +A D  V  II+A++K GG+ L+TADHGNAE M +   +GEP          T+HT  PV     G G    VK    L NG L+++A T ++L G   P +
Sbjct:  374 TYDLKPEMSAYEVTDEVIRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVQAVEAVDTCVGRIIEALKKAGGVALITADHGNAEQM-ENQHTGEP---------HTAHTSNPVRCIYAGKG---EVK---ALENGKLSDLAPTLLDLLGVPKPEE 511          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_VIBVY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio vulnificus (strain YJ016) GN=gpmI PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19
Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN+DMVGHTG  EA   A +A D +V  +++AI++VGG  L+TADHGNAE MV     G          + T+HT  PVP+   G      V+F+     G L+++A T ++L G E P++
Sbjct:  365 TYDLQPEMSSTELTEKMVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEKAIEALDASVGQVVEAIKEVGGQLLITADHGNAEMMVDPETGG----------IHTAHTSLPVPLIYVG---DKAVEFK---EGGKLSDLAPTMLSLAGLEIPAE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_VIBVU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio vulnificus GN=gpmI PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19
Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN+DMVGHTG  EA   A +A D +V  +++AI++VGG  L+TADHGNAE MV     G          + T+HT  PVP+   G      V+F+     G L+++A T ++L G E P++
Sbjct:  365 TYDLQPEMSSTELTEKMVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEKAIEALDASVGQVVEAIKEVGGQLLITADHGNAEMMVDPETGG----------IHTAHTSLPVPLIYVG---DKAVEFK---EGGKLSDLAPTMLSLAGLEIPAE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SHELP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19
Identity = 56/155 (36.13%), Postives = 84/155 (54.19%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ ++  +AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  +++A+ KV G  L+TADHGNAE M                Q  T+HT + VP I +G  G           PNG L+++A T + L G   PS+
Sbjct:  367 TYDLQPEMSSTELTDKLVEAIESTQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVDGECLITADHGNAEQMTDEQTG----------QAHTAHTSELVPLIYVGRKG--------EIAPNGRLSDLAPTMLTLMGQTVPSE 503          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ECOLI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli (strain K12) GN=gpmI PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     NVK    +  G L+++A T ++L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVG---DKNVK---AVEGGKLSDIAPTMLSLMGMEIPQE 504          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_PSYIN1.370e-1936.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOLC1.370e-1939.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOHS1.370e-1939.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECO571.370e-1939.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECO241.370e-1939.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METAC1.370e-1938.962,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBVY1.789e-1937.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBVU1.789e-1937.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHELP1.789e-1936.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOLI1.789e-1938.962,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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