EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PARDP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Paracoccus denitrificans (strain Pd 1222) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 55/154 (35.71%), Postives = 85/154 (55.19%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E++ +  +AI    +  + VN  N DMVGHTG + A + AC+A D+ + ++++A+EK GG  +V ADHGN E  +     G            T+HT  PVP+ + G   P+  K R    NG LA+VA T ++L G + P +
Sbjct:  361 TYDLAPEMAAPEVSAKLVEAI-EAGYDLIVVNYANPDMVGHTGSLPAAIRACEAVDKGLGMMLEALEKAGGAAVVIADHGNCETTIDPETGGPH----------TAHTTNPVPVIVFGG--PEGAKLR----NGRLADVAPTVLDLMGLDLPPE 497          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI2_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 58/154 (37.66%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A EI +   + I S ++  + +N  N DMVGHTG  EA V A +A D+ +  I++ +++ GG+ L+TADHGNAE+M+   K+GEP          T+HT  PV     G     N + +A L NG L +VA T + L G   P +
Sbjct:  378 TYDLKPEMSAYEITDEVIRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVKAVEAVDKCIGRIVEVLKEKGGVALITADHGNAEEMIDL-KTGEP---------HTAHTSNPVKCIYFG-----NSEIKA-LRNGKLCDVAPTILELLGIPKPQE 515          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SALTI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhi GN=gpmI PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.800e-19
Identity = 58/154 (37.66%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     NVK    +  G L+++A T ++L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM-RDPATG---------QEHTAHTNLPVPLIYVG---EKNVK---AVEGGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SALCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella choleraesuis GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.800e-19
Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  +  +  A+E VGG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     NVK    +  G L+++A T ++L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIDQVTKAVESVGGQLLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVG---EKNVK---AVEGGKLSDIAPTMLSLMGMEIPQE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_METMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanosarcina mazei GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.800e-19
Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINL 448
            T++  P+M A E+ +   K ILS ++  + +N  N DMVGHTGD EA V A +  D  V  I++A+   GG  L+TADHGNAE M + + +GEP          T+HT  PV     G G    VK    L NG L+++A T ++L
Sbjct:  374 TYDLKPEMSAYEVTDEVVKRILSGKYDVIILNFANMDMVGHTGDFEAAVKAVETVDNCVGRIVEALRTAGGAALITADHGNAEQM-ENSHTGEP---------HTAHTSNPVKCIYTGNG---EVK---ALENGKLSDLAPTLLDL 503          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.800e-19
Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ ++  + I  + +  + +N  N DMVGHTG  EA   A +A DE +  ++ A+ +  G+ L+TADHGN+E M+     G            T+HT  PVP+ + G G   +VK R     G LA++A T +++ G+E P +
Sbjct:  366 TYDLKPEMSAYEVTDKVLECINKKEYDVIILNYANPDMVGHTGVFEAAKAAIEAIDECLGKVVPAVLEQNGVVLITADHGNSEQMIDYETGGP----------FTAHTTNPVPLIVIGLG---DVKLR----EGRLADLAPTMLDILGFEKPKE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SHEON (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella oneidensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 54/155 (34.84%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  +++A+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G          A +  GG L++VA T ++L G   P++
Sbjct:  367 TYDLQPEMSSTELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRD--------ATIDKGGKLSDVAPTILHLMGESIPAE 503          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PSESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. tomato GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M A E+ ++   AI  +R+  + VN  N DMVGH+G +EA + A +  D  V  I DA+EKVGG  L+TADHGN E M            D   Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P +
Sbjct:  363 TYDLQPEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGIMEAAIKAVEYLDVCVGRITDALEKVGGEALITADHGNVEQMT----------DDATGQAHTAHTSEPVPFVYVG-------KRQLKVREGGVLADVAPTMLQLLGMEKPQE 500          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ENT38 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sp. (strain 638) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 58/154 (37.66%), Postives = 82/154 (53.25%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +  D  V+ +  A+E VGG  L+TADHGNAE M  R+ S          Q  T+HT  PVP+   G       K    +  G L+++A T + L G E P +
Sbjct:  367 TYDLQPEMSSAELTEKLVAAITSGKYDTIICNYPNGDMVGHTGVMEAAVKAVETLDHCVEQVAKAVESVGGQLLITADHGNAEQM--RDPS--------TGQAHTAHTNLPVPLIYVGE------KSLKAVEGGKLSDIAPTMLTLMGMEIPKE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_AGRT5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAI-GGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ E+  + ++ + +  +  N  N DMVGHTGD++A + AC+A D  +  ++ A+EKVGG  LV ADHGN E MV     G            T+HT  PVP+ + GGP         A + +G LA+VA T + L     P +
Sbjct:  360 TYDLQPEMSAAEVTEKFVE-VIGKGYDLIVTNYANPDMVGHTGDLQAAIKACEAVDRGLGAVVAALEKVGGAMLVIADHGNCETMVDPVTGGPH----------TAHTTNPVPVILFGGPE-------GAKVHDGILADVAPTLLQLMNVPLPPE 496          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_PARDP5.207e-1935.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METBF5.207e-1937.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALTI6.800e-1937.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALCH6.800e-1937.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METMA6.800e-1939.732,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOTH6.800e-1933.772,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEON8.881e-1934.842,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSESM8.881e-1938.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENT388.881e-1937.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AGRT58.881e-1936.132,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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