EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18
Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++L G   P +
Sbjct:  367 TYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A ++++   +AI    +  + VN  N DMVGHTGD+ A + AC+  D  +   ++A+ + GG  +VTADHGN E M+     G            T+HT  PVP I +GGP         A L  G LA++A T + L G   P +
Sbjct:  361 TYDLKPEMSAPDVSDHLVQAI-GEGYDLIVVNYANPDMVGHTGDLRAAMAACEEVDRGLGRAVEAVRQAGGAMIVTADHGNCETMIDPETGGPH----------TAHTTNPVPVILVGGPA-------GARLRAGRLADLAPTLLELMGLPQPEE 497          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_GLOVI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gloeobacter violaceus GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPI------AIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ + A  AI +R++  + +N  N DMVGHTG+ +ATV A +  D  +  +++A  + GG  L+TADHGNAE M   ++ G P          T+HT  PVP        +  PG   +V+ RA    G L ++A T + + G   P++
Sbjct:  366 TYDLKPEMAAREVTDHAVAAIETRQYSLIVINYANPDMVGHTGNFDATVKAVETVDACIGRLVEACVRAGGTMLLTADHGNAELM--WDEQGNP---------WTAHTTNPVPFILIESEGLKIPGWGTDVQLRA---GGSLGDIAPTILEILGLPQPAE 511          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_EHRCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia chaffeensis (strain Arkansas) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM--VKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T+N +P+M A E+     + I  +++  + +N  N+DMVGHTG+IEAT  A  A D+ +  I++ I+    + ++TADHGNAE+M  VK N               T+HTL PVP  I       N   +  L NG L +VA T + +   E P +
Sbjct:  354 TYNLMPEMSAKEVTNTVIERIKLQKYSLIILNYANADMVGHTGNIEATKQAITALDQCLNKILNCIQGTNYVLVITADHGNAEEMFDVKNN------------MPYTAHTLNPVPFII------CNYSKQIRLKNGRLCDVAPTILEILNIEKPKE 491          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SHEFN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella frigidimarina (strain NCIMB 400) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 55/156 (35.26%), Postives = 83/156 (53.21%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD-GNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M + E+ ++   AI S ++  +  N PN DMVGH+G+ +A V AC+A D  +  +++A+ KV G  L+TADHGNAE M           KD  N Q  T+HT   VP    G          A + +GG L+++A T + L G   P +
Sbjct:  366 TYDLQPEMSSTELTDKLVAAIESTKYDVIICNYPNGDMVGHSGNFDAAVKACEAVDACIGRVVEALAKVDGECLITADHGNAEKM-----------KDPSNGQAFTAHTSNLVPFVYVGRD--------AVIKDGGRLSDIAPTMLTLMGQSIPKE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SERP5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Serratia proteamaculans (strain 568) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 58/156 (37.18%), Postives = 84/156 (53.85%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M A E+ ++   AI S ++  +  N PN DMVGHTG  +A V A +  D  +  +++A++ V G  L+TADHGNAE M +   +G         Q  T+HT  PVP I IG P         A   NGG L+++A T + L G E P +
Sbjct:  368 TYDLQPEMSAAELTDKLLAAIASGKYDAIICNYPNGDMVGHTGVYDAAVKAVETLDNCIAQVVEAVKAVDGQLLITADHGNAEQM-RDPATG---------QAHTAHTSLPVPLIYIGKP---------ASAVNGGKLSDIAPTMLALMGMEIPQE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_VIBFM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain MJ11) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.675e-17
Identity = 55/154 (35.71%), Postives = 85/154 (55.19%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ E+   AI S ++  +  N PN DMVGHTG  +ATV A ++ DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      ++F+     G L+++A T + L     P++
Sbjct:  365 TYDLQPEMSAPELTEKLVAAIKSGKYDAIVCNFPNCDMVGHTGVYDATVKAVESLDECIGKVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---SKAIEFK---EGGKLSDLAPTMLALTDTAIPAE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PSEHT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.675e-17
Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M +  + ++   AI S ++  +  N PN DMVGH+G   A V AC+A D  +  ++ A+ K GG  L+TADHGNAE M          LK G  Q  T+HT +PVP I +G        K         L++VA T ++L G E P++
Sbjct:  368 TYDLQPEMNSEMLTDKLVAAIKSGKYDAIICNYPNGDMVGHSGVFAAAVKACEAVDHCIGRVVAALNKYGGEALITADHGNAEQMAN--------LKTG--QAHTAHTSEPVPFIYVGRDATASEGK--------ALSDVAPTMLHLMGMEQPTE 504          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_YERE8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++ V G  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     N + +A +  G L+++A T ++L   E P +
Sbjct:  368 TYDLQPEMSSAELTEKLVGAIASGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVQAVDGQLLITADHGNAEQM-RDPATG---------QAHTAHTSLPVPLIYVG-----NKEVKA-VEGGKLSDIAPTMLSLMEMEIPQE 505          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_MYCCT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=gpmI PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDA-IEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYE 478
            T++  P+M A+EI ++  + I    F  + +N  N DMVGHTG+ +AT +ACK  D+ +K I D  + K  GI ++TADHGNAE M+           D + QV   HT   VPI I       N+K + + P   +A VA T ++L   E P + E
Sbjct:  384 TYDLKPQMSAVEITDKLLEEIKKDEFDFIVLNFANCDMVGHTGNNKATEIACKTLDDQLKRIHDEFVLKHNGIMVITADHGNAEIMI-----------DKDDQVNKKHTTSLVPIII----TDKNIKLKQNDP--AIAKVAPTILDLMNIEIPKEME 523          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_BACST7.518e-1835.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOS59.819e-1834.842,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GLOVI9.819e-1834.382,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRCR9.819e-1835.262,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEFN1.282e-1735.262,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SERP51.282e-1737.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBFM1.675e-1735.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEHT1.675e-1736.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERE82.187e-1735.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCCT2.187e-1736.942,3-bisphosphoglycerate-independent phosphoglycera... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
back to top