EY685070

Overview
NameEY685070
Unique NameEY685070
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_BART1 (Argininosuccinate lyase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=argH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.090e-11
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 3
Query:    9 VAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            + H ++AYVE   RD  R++  + RMN  PLGA ALAGT  PIDRFMTA+AL F  P RN
Sbjct:  171 LGHYMMAYVEMFGRDLSRMRDASERMNESPLGAAALAGTSFPIDRFMTAQALGFREPTRN 230          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_ACIC5 (Argininosuccinate lyase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=argH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.090e-11
Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 3
Query:    6 LVAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            LVAH LLAY E L RDA RL+ C  R+N+CPLG+ A+AG  L +DR + ++AL F AP  N
Sbjct:  169 LVAHWLLAYAEMLLRDASRLEDCVRRLNYCPLGSGAVAGATLALDRGIASQALNFAAPTAN 229          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_PROMA (Argininosuccinate lyase OS=Prochlorococcus marinus GN=argH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.683e-11
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 3
Query:    9 VAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            +AH LLAY+E L+RD  RL     R+N CPLGA ALAGT LPIDR  TA  L FT+   N
Sbjct:  165 LAHHLLAYIEMLQRDRNRLADVRERVNICPLGAAALAGTSLPIDRAFTANQLGFTSIYSN 224          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_METNO (Argininosuccinate lyase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=argH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.683e-11
Identity = 35/58 (60.34%), Postives = 37/58 (63.79%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H LLAYVE L RD GR +    R+N CPLGA ALAGT  PIDR  TA AL F  P  N
Sbjct:  168 HHLLAYVEMLARDRGRFRDARARLNECPLGAAALAGTSFPIDRHATAAALGFDRPTAN 225          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_HALHL (Argininosuccinate lyase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=argH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.683e-11
Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H +LA+ E LERD  RL  C  R+N CPLGA ALAGT  PIDR  TA  L F AP RN
Sbjct:  175 HHMLAWYEMLERDRDRLADCRRRLNQCPLGAAALAGTSFPIDREATARELGFDAPTRN 232          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_DINSH (Argininosuccinate lyase OS=Dinoroseobacter shibae (strain DFL 12) GN=argH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.683e-11
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H ++AYVE   RD GR+Q    RMN CPLGA ALAGT  P+DR  TA+AL F  P  N
Sbjct:  172 HHMMAYVEMFARDRGRMQDARARMNECPLGAAALAGTSFPLDRDATAQALGFDRPAAN 229          
The following BLAST results are available for this feature:
BLAST of EY685070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ARLY_BART15.090e-1156.67Argininosuccinate lyase OS=Bartonella tribocorum (... [more]
ARLY_ACIC55.090e-1155.74Argininosuccinate lyase OS=Acidobacterium capsulat... [more]
ARLY_PROMA8.683e-1158.33Argininosuccinate lyase OS=Prochlorococcus marinus... [more]
ARLY_METNO8.683e-1160.34Argininosuccinate lyase OS=Methylobacterium nodula... [more]
ARLY_HALHL8.683e-1160.34Argininosuccinate lyase OS=Halorhodospira halophil... [more]
ARLY_DINSH8.683e-1156.90Argininosuccinate lyase OS=Dinoroseobacter shibae ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685070 ID=EY685070; Name=EY685070; organism=Citrus sinensis; type=EST; length=996bp
CCTGTCTTGTTGCACATCCCCTTCTGGCATATGTTGAGCACCTTGAACGT
GATGCTGGTCGTTTACAATATTGCACAGTTAGGATGAATTTCTGCCCTCT
TGGTGCATGTGCATTGGCTGGCACTGGCCTGCCCATTGACAGGTTTATGA
CTGCGGAAGCTTTACAATTTACTGCTCCCATGAGGAACAGGTATGTGCTG
AAACAAAACGAACCTTGAATGTGGCCTTTTGATATGTCAGGGTGACAAAC
TGACAATTGAAACTATATGCTGCTGCAGTCTTTGGTATCCACTTTTTCTG
TTCCACACCATAAACCCAATTTTGTTGGCCACTTCAATTGTCAAGTCTAG
AGTATCAGCTTTTGGAATTTCCTCAACTCCACTTCAATTTGTAATCTTTA
TATATGTTTATGGTTGGAAAATGGCTGCATTATGCTATCATATGACTCGA
TTTGATCCATTCAAATATCTGGGACTTACTCTCTGAACACATCTCTTGCG
ATAAGTTGACATTCCACTTTGATTCTATAACTAAAATGTCATTTTGAAAC
GCGACCTTATTAGTTATGGACTATTCAACTACTTGAACTGAATCAACAAA
ATAACGAAGTCCATTTGTTCCCTTTTTTTTGCTCAATTCTCCTTCTCTCT
GCAACAAGGGTTCCTAGCACTGAATCAGCCAGGAACTTAGGATGCTCCAC
AACGTTACAGGTCCAATAAAGACCGCAAACTCCTTCGAAAAAACCCTTCC
TCCCATCTCCACAAAAACCTTTCCCCCTACCCGGGCCGGGGAAATCCAAG
CCAATCAGCACACTCATAACTAGACTACTTACACTCCTCCACCCGCCACC
TGCCGCGCCTCCGAACAACACCACTTCATCAGCTCCTAGCATGGAACACC
TCACTGCACCCAAAGATCACTCACACAATACACACAAACACCGATCACTC
CATCAGCCTCACACTCTCTCAAATATAACAATGTAAAACGACGACA
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