EY685062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 3.633e-62 Identity = 124/229 (54.15%), Postives = 161/229 (70.31%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDL 654 KW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG T +SLTE+DF+ L RKT+G+SG+DIS+ V+D L +PVRK Q A F K N + PC P GA++++ ++ +++L P +S D + L +PTV++ DL Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDVP----GDKLLEPVVSMWDMLRSLSSTKPTVNEQDL 430 HSP 2 Score: 21.9422 bits (45), Expect = 3.633e-62 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 650 ILKFKREFTKEFGEEG 697 +LK K+ FT++FG+EG Sbjct: 430 LLKLKK-FTEDFGQEG 444
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 8.275e-62 Identity = 129/228 (56.58%), Postives = 159/228 (69.74%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669 KWMGESEKLV LF MARE+ PSIIFIDE+D+L G RGEG ESEASRRIKTELLVQM GVG++ Q VLVL ATN P+ LD AIRRRF++RIYIPLPDL AR MF++++GDTP LT+ D+ +L TEG+SGSDI+V VKD L +P+RK Q A F S PC P GA+++S ++ A L E P ++ DF K + RPTV++ DL QE+ Sbjct: 205 KWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEG-ESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKE----PDLTIKDFLKAIKSTRPTVNEDDLLKQEQ 427
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 1.050e-61 Identity = 124/229 (54.15%), Postives = 161/229 (70.31%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDL 654 KW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T +SLTE+DF L RKT+G+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ +++L P +S +D + L +PTV++ DL Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVP----GDKLLEPVVSMSDMLRSLSNTKPTVNEHDL 430 HSP 2 Score: 21.9422 bits (45), Expect = 1.050e-61 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 650 ILKFKREFTKEFGEEG 697 +LK K+ FT++FG+EG Sbjct: 430 LLKLKK-FTEDFGQEG 444
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.035e-61 Identity = 123/229 (53.71%), Postives = 161/229 (70.31%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDL 654 KW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQM+GVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T +SLTE+DF L RKT+G+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ +++L P +S +D + L +PTV++ DL Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVP----GDKLLEPVVSMSDMLRSLSNTKPTVNEHDL 430 HSP 2 Score: 21.9422 bits (45), Expect = 3.035e-61 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 650 ILKFKREFTKEFGEEG 697 +LK K+ FT++FG+EG Sbjct: 430 LLKLKK-FTEDFGQEG 444
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.035e-61 Identity = 123/229 (53.71%), Postives = 160/229 (69.87%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDL 654 KW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T +SLTE+DF L +KTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ +++L P + +D + L +PTV++ DL Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDLGKKTEGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNNIVDDLLTPCSPGDPGAIEMTWMDVP----GDKLLEPVVCMSDMLRSLSSTKPTVNEHDL 430 HSP 2 Score: 21.9422 bits (45), Expect = 3.035e-61 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 650 ILKFKREFTKEFGEEG 697 +LK K+ FT++FG+EG Sbjct: 430 LLKLKK-FTEDFGQEG 444
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.144e-61 Identity = 121/229 (52.84%), Postives = 159/229 (69.43%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDL 654 KW+GESEKLV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPH+LT+++ LARKTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ +++L P + +D + L RPTV+ DL Sbjct: 200 KWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSVMIDDLLTPCSPGDPGAIEMTWMDVP----GDKLLEPVVCMSDMLRSLATTRPTVNADDL 423
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.144e-61 Identity = 121/229 (52.84%), Postives = 159/229 (69.43%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDL 654 KW+GESEKLV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPH+LT+++ LARKTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ +++L P + +D + L RPTV+ DL Sbjct: 200 KWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSVMIDDLLTPCSPGDPGAIEMTWMDVP----GDKLLEPVVCMSDMLRSLATTRPTVNADDL 423
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 5.363e-61 Identity = 121/229 (52.84%), Postives = 159/229 (69.43%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDL 654 KW+GESEKLV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPH+LT+++ LARKTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ +++L P + +D + L RPTV+ DL Sbjct: 200 KWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSMMIDDLLTPCSPGDPGAMEMTWMDVP----GDKLLEPVVCMSDMLRSLATTRPTVNADDL 423
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.015e-57 Identity = 118/231 (51.08%), Postives = 153/231 (66.23%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFF-----FKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQERIHK 678 KWMGESE+LV LF+MARE PSIIFIDEIDSLCG R EG ESE+SRRIKTE LVQM GVG ++ VLVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++++G P LT DF+ LA+ T+G+SGSDIS+ V+D + EPVR+ A F K++ + PC P A + S E+ E I+ P ++ DF + + +PT++ D+E + K Sbjct: 201 KWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEG-ESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRRIHTATHFKEVYDNKSNRTLVTPCSPGDPDAFESSWLEVN----PEDIMEPKLTVRDFYSAVRKVKPTLNAGDIEKHTQFTK 426
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.239e-49 Identity = 108/229 (47.16%), Postives = 148/229 (64.63%), Query Frame = 1 Query: 1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFK----------TSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLE 657 KW+G+SEKLV LF+MARE S+IFIDE+DSLC R + ESE++RRIKTE L+QM GVG++ +LVLAATN P+ LD AIRRRF+KRIYI LP+ +AR MF++H+G TP++L ++D++ LA TEG+SGSDI VKD + +PVR Q A F + PC P A +++ ++ L E P I+ D K L +P+V+K+DL+ Sbjct: 207 KWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLCSSRND-QESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIRRRFEKRIYIGLPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPVRAVQCATHFKQIRAPSREDPSVMTDYVTPCSPGDPLAQEMTWMDIDPTKLKE----PEITIADCLKSLRVIKPSVNKADLD 430 The following BLAST results are available for this feature:
BLAST of EY685062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 362
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY685062 ID=EY685062; Name=EY685062; organism=Citrus sinensis; type=EST; length=993bpback to top |