EY685062

Overview
NameEY685062
Unique NameEY685062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KATL1_DANRE (Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio GN=katnal1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.052e-36
Identity = 94/228 (41.23%), Postives = 133/228 (58.33%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQK------VLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQE 666
            K+ GESEKLV  LF+MAR  AP+ IFIDEIDS+CG+RG  +E EASRR+K+ELLVQM GVG   +       V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +   + ++ D    A K EG+SG+DI+   +D     +R+                           +S +E+ A  L++  L  P++  DF+  L +   +VS +DLE  E
Sbjct:  278 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVGGAQESEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVDVA-SDVDLTVFAEKIEGYSGADITNVCRDASMMAMRRRIQG-----------------------LSPEEIRA--LSKDELQMPVTMEDFELALKKISKSVSAADLEKYE 479          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.971e-36
Identity = 77/156 (49.36%), Postives = 112/156 (71.79%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG------HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRK 450
            K+ GESEKLV  LF+MAR  APS IFIDEIDS+C +RG G+E EASRR+K+ELL+QM GV        + + V+VLAATN P+ +D+A+RRR +KRIYIPLP++  R+ + +++L + P +  + D +S+A K +G+SG+DI+   +D     +R+
Sbjct:  306 KYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLA-DDIDLKSIAEKMDGYSGADITNVCRDASMMAMRR 460          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 5.055e-35
Identity = 79/168 (47.02%), Postives = 109/168 (64.88%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHN-----------DQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFF 471
            K++GESEKLV +LF MA++ +PSIIFIDEIDS+   R + NE+E+SRRIKTELL+Q   +              D +VLVL ATN P+A+D A RRRF +++YIPLPD + R +  K  +    +SL + D+E +   TEGFSGSD++   K+   EP+R   D + F
Sbjct:  543 KYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSD-NENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMF 709          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 5.055e-35
Identity = 90/229 (39.30%), Postives = 133/229 (58.08%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669
            K+ GESEKLV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + +++L +      + D  ++A K EG+SG+DI+   +D     +R+  +                        ++ +E+  + L+   +  P +  DF+  L +   +VS +D+E  E+
Sbjct:  282 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLREL-ELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRRIEG-----------------------LTPEEI--RNLSRDEMHMPTTMEDFEIALKKVSKSVSAADIEKYEK 484          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.126e-34
Identity = 89/229 (38.86%), Postives = 133/229 (58.08%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669
            K+ GESEKLV  LF+MAR  +P+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + ++ L +      + D  S+A   EG+SG+DI+   +D     +R+  +                        ++ +E+  + L+++ +  P +  DF+  L +   +VS +D+E  E+
Sbjct:  281 KYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEG-----------------------LTPEEI--RNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYEK 483          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.126e-34
Identity = 89/229 (38.86%), Postives = 133/229 (58.08%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669
            K+ GESEKLV  LF+MAR  +P+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + ++ L +      + D  S+A   EG+SG+DI+   +D     +R+  +                        ++ +E+  + L+++ +  P +  DF+  L +   +VS +D+E  E+
Sbjct:  281 KYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEG-----------------------LTPEEI--RNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYEK 483          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.471e-34
Identity = 90/228 (39.47%), Postives = 133/228 (58.33%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND--QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669
            K+ GESEKLV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND  + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +   +  + + + +A + EG+SG+DI+   +D     +R+  +                        ++ +E+  + L +  +  P +  DF+  L +   +VS +DLE  E+
Sbjct:  276 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVDLLKINLKELDLA-NDVNMDKIAEQMEGYSGADITNVCRDASLMAMRRRIEG-----------------------LTPEEI--RNLPKDEMHMPTTMEDFETALKKVSKSVSAADLEKYEK 477          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.921e-34
Identity = 90/229 (39.30%), Postives = 129/229 (56.33%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG------HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669
            K+ GESEKLV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG         + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + +++L +      + D   +A ++EG+SG+DI+   +D     +R+  +                        ++ +E+     AE  +P  +   DF+  L +   +VS SDLE  E+
Sbjct:  276 KYRGESEKLVRILFEMARFYAPTTIFIDEIDSMCSRRGTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVELLRINLKEL-ELANDVDMAKIAEQSEGYSGADITNVCRDASLMAMRRRIEG-----------------------LTPEEIRNISRAEMHMPTTME--DFESSLKKVSKSVSASDLEKYEK 478          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.277e-34
Identity = 87/229 (37.99%), Postives = 130/229 (56.77%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQK------VLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669
            K+ GESEKLV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG   +       V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + +++L +      + + E +A   +G+SG+DI+   +D     +R+  +                        ++ +E+  + L+   +  P +  DF+  L +   +VS SD+E  E+
Sbjct:  282 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKEL-ELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEG-----------------------LTPEEI--RNLSRDDMHMPTTMEDFEMALKKVSKSVSASDIEKYEK 484          
BLAST of EY685062 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.277e-34
Identity = 87/229 (37.99%), Postives = 130/229 (56.77%), Query Frame = 1
Query:    1 KWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQK------VLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLGRQRPTVSKSDLEVQER 669
            K+ GESEKLV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG   +       V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + +++L +      + + E +A   +G+SG+DI+   +D     +R+  +                        ++ +E+  + L+   +  P +  DF+  L +   +VS SD+E  E+
Sbjct:  278 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKEL-ELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEG-----------------------LTPEEI--RNLSRDDMHMPTTMEDFEMALKKVSKSVSASDIEKYEK 480          
The following BLAST results are available for this feature:
BLAST of EY685062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
KATL1_DANRE2.052e-3641.23Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KTNA1_STRPU5.971e-3649.36Katanin p60 ATPase-containing subunit OS=Strongylo... [more]
TBP6_YEAST5.055e-3547.02Probable 26S protease subunit YTA6 OS=Saccharomyce... [more]
KTNA1_CHICK5.055e-3539.30Katanin p60 ATPase-containing subunit A1 OS=Gallus... [more]
KTNA1_MACFA1.126e-3438.86Katanin p60 ATPase-containing subunit A1 OS=Macaca... [more]
KTNA1_HUMAN1.126e-3438.86Katanin p60 ATPase-containing subunit A1 OS=Homo s... [more]
KTNA1_DANRE1.471e-3439.47Katanin p60 ATPase-containing subunit A1 OS=Danio ... [more]
KTNA1_SALSA1.921e-3439.30Katanin p60 ATPase-containing subunit A1 OS=Salmo ... [more]
KTNA1_XENTR3.277e-3437.99Katanin p60 ATPase-containing subunit A1 OS=Xenopu... [more]
KTNA1_XENLA3.277e-3437.99Katanin p60 ATPase-containing subunit (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-C08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685062 ID=EY685062; Name=EY685062; organism=Citrus sinensis; type=EST; length=993bp
AAGTGGATGGGTGAAAGTGAAAAGCTTGTCTCAAGCCTTTTCCAGATGGC
TCGTGAAAGTGCTCCTTCCATTATTTTTATTGATGAAATAGATTCCTTAT
GTGGTCAGCGTGGAGAAGGCAATGAGAGCGAAGCTTCTCGGCGCATCAAA
ACTGAACTTCTTGTACAGATGCAGGGTGTTGGACACAACGATCAGAAAGT
TCTTGTTCTTGCTGCAACAAATACTCCCTATGCTCTAGATCAGGCCATCC
GGCGACGTTTTGACAAGCGTATATACATCCCTCTTCCAGATTTGAAGGCA
AGACAGCACATGTTCAAGGTGCATTTAGGAGATACACCCCACAGTTTGAC
TGAAAGTGATTTTGAAAGTTTAGCTCGCAAGACCGAGGGGTTTTCTGGTT
CTGATATTTCCGTTTGTGTAAAGGATGTCTTGTTCGAACCTGTACGGAAA
ACTCAGGATGCCATGTTTTTCTTTAAGACCTCTAATGGTATGTGGATGCC
ATGTGGACCGAAGCAATCAGGTGCTGTTCAGATTTCGATGCAGGAGCTTG
CAGCAAAAGGGCTTGCAGAACAGATCCTTCCACCCCCTATTTCGAAAACA
GATTTTGATAAAGTTCTTGGCAGACAGAGGCCAACAGTGAGCAAAAGTGA
TCTTGAAGTTCAAGAGAGAATTCACAAAGGAGTTTGGAGAGGAAGGGTAA
TGGGGCCTATTATGCACATAAATGCTGAATCATGCTAATGAGTGGCAAGC
ATATGAATCTTGATGTATTTTATCACTTCTGGGATCAATCCATTTTCCTC
CTCCAAAAAGGGGAGGGGGACTTGGATTTCCCTTTATTCGGGATTCCAAT
GGGAAAAATGGGGGGTTTGAAACTTGTAAATTTTTTTTGGTTTGAAATTT
GGGAAAAAAACACGATCCCCCACAATTAAGGGCCTCTACTTTGCTGTGTC
GGTTTTCACAAAAAAAAAACAAAAAAGGGGCTGCCCCACTTCA
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