EY685056

Overview
NameEY685056
Unique NameEY685056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 8.078e-30
Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.078e-30
Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.055e-29
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.378e-29
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLR+RGG
Sbjct:    3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.800e-29
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITL+VE SDTI+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPD QRLIFAGK LE+GR LADYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITLEVE SD+I+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITLEVE SD+I+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITLEVE SD I+NVKAKIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY685056 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.839e-29
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 3 
Query:  264 MFGRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDHQRLIFAGKHLEDGRALADYNIQKESTLHLVLRLRGG 485
            +F +TLTGKTITL+VE SD+IDNVK KIQDKEGIPPD QRLIFAGK LEDGR L+DYNIQKESTLHLVLRLRGG
Sbjct:    3 IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY685056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
UBIQ_CAMDR8.078e-3087.84Ubiquitin OS=Camelus dromedarius PE=3 SV=2[more]
UBIQ_BOVIN8.078e-3087.84Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1[more]
UBIQ_TETPY1.055e-2986.49Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ... [more]
UBIQ_SHEEP1.378e-2986.49Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2[more]
UBIQ_EIMBO1.800e-2986.49Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]
UBIQ_TRYBB2.350e-2986.49Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1[more]
UBIQ_STRPU2.350e-2986.49Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV... [more]
UBIQ_ENCCU2.350e-2986.49Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074... [more]
UBIQ_DICDI2.350e-2986.49Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1... [more]
UBIQ_PHYIN6.839e-2985.14Ubiquitin OS=Phytophthora infestans PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685056 ID=EY685056; Name=EY685056; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGGTCAAACTCAACCATGGGCACCTTTTTGGCAAATTCGAC
CGGGAAAAACGACCCTGTCGAGCTTGACTCTACCCACACTTTGTGAAATG
ACTTGGCAGGTATACAATACGAGGAAGGCATGACACCGCGAACAGCGAAA
TACCGCTACTTTTAACATTATTTTACTAATTCCGGGACTCCGTAGGCGGA
TGACCTGCCCCTCATTGAGGACACTCTGCCCCCCCTCCTCCGTCTCCCCG
GGGGGATAGCACAATGTTCGGCAGGACTCTGACCGGGAAGACGATCACCC
TGGAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAG
GACAAGGAAGGGATCCCCCCGGACCACCAGAGGCTCATCTTCGCCGGCAA
GCACCTGGAGGACGGGCGCGCCCTGGCCGATTATAACATCCAGAAGGAAT
CCACCCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCCCATCTTCGAC
AAGACAGTTGACCGGGAACACCACTACCCTGCAGGCGGAGAGCCCCGACC
TCACCCACCACCACACAGCCCAGATCCGCGCAGGCAGGCAGAACCGCCCC
AATCCCCGCTCACGGATCTCCAAGGGGGCGCAGCCCCACCGCTCGCATCC
ACACTCGGGCCCCACGACCCGAACCAAGCCCCGACACTGACCCCCGCCGA
ACGCCAGGTCAGAGACATGCGCACAAGAGCCGCCGCGAGCTCAAACATCG
TCTGCCCAGCCAGCACCGCCCGATAATACGCCGCCCTCCCACTCCCCAGC
GATACCGCAACCTCCCCCGCAGCCCCGCACCTCAACCCCACCCGCAACAT
CTATTCCTCTAGTTGGAATATAAGAAGAAAGAACCCCAAATCCACGTGCC
TCAACCCCCAACACTTCAAATACTCACAAGCATCACACACCCCACCGACC
CCCCCCCCCCATCCCCCCACCCGCC
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