EY685053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 1.083e-53 Identity = 106/157 (67.52%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+GES LV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG T +SLTE+DF+ L RKT+G+SG+DIS V+DAL +PVRK Q A F Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHF 362
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.083e-53 Identity = 107/157 (68.15%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+GES LV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T +SLTE+DF L +KTEG+SG+DIS V+DAL +PVRK Q A F Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDLGKKTEGYSGADISIIVRDALMQPVRKVQSATHF 362
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.848e-53 Identity = 107/157 (68.15%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+GES LV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T +SLTE+DF L RKT+G+SG+DIS V+DAL +PVRK Q A F Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHF 362
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.413e-53 Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+GES LV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPH+LT+++ LARKTEG+SG+DIS V+D+L +PVRK Q A F Sbjct: 200 KWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHF 355
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.413e-53 Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+GES LV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPH+LT+++ LARKTEG+SG+DIS V+D+L +PVRK Q A F Sbjct: 200 KWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHF 355
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.413e-53 Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+GES LV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPH+LT+++ LARKTEG+SG+DIS V+D+L +PVRK Q A F Sbjct: 200 KWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHF 355
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 5.376e-53 Identity = 106/157 (67.52%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+GES LV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQM+GVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T +SLTE+DF L RKT+G+SG+DIS V+DAL +PVRK Q A F Sbjct: 207 KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHF 362
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.564e-52 Identity = 107/162 (66.05%), Postives = 126/162 (77.78%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLFLTTST 497 KWMGES LV LF MARE+ PSIIFIDE+D+L G RGEG ESEASRRIKTELLVQM GVG++ Q VLVL ATN P+ LD AIRRRF++RIYIPLPDL AR MF++++GDTP LT+ D+ +L TEG+SGSDI+ VKDAL +P+RK Q A F ST Sbjct: 205 KWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEG-ESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVST 365
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 7.266e-50 Identity = 101/157 (64.33%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KWMGES LV LF+MARE PSIIFIDEIDSLCG R EG ESE+SRRIKTE LVQM GVG ++ VLVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++++G P LT DF+ LA+ T+G+SGSDIS V+DA+ EPVR+ A F Sbjct: 201 KWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEG-ESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRRIHTATHF 356
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.732e-46 Identity = 91/157 (57.96%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482 KW+G+S LV LF+MARE S+IFIDE+DSLC R + ESE++RRIKTE L+QM GVG++ +LVLAATN P+ LD AIRRRF+KRIYI LP+ +AR MF++H+G TP++L ++D++ LA TEG+SGSDI VKDA+ +PVR Q A F Sbjct: 207 KWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLCSSRND-QESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIRRRFEKRIYIGLPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPVRAVQCATHF 362 The following BLAST results are available for this feature:
BLAST of EY685053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 359
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685053 ID=EY685053; Name=EY685053; organism=Citrus sinensis; type=EST; length=996bpback to top |