EY685053

Overview
NameEY685053
Unique NameEY685053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.971e-36
Identity = 86/188 (45.74%), Postives = 114/188 (60.64%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG-------------------HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLFLTTSTGMTMPWG 518
            K++GES  LV +LF +A++ +PSIIF+DEIDS+ G R   NE+E+SRRIK E LVQ   +                     +D +VLVLAATN P+++D+A RRRF +R YIPLP+ + R   FK  L    H+LTESDF+ L + TEG+SGSDI+   KDA   P+R   D +  L T   M  P G
Sbjct:  677 KYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARRRFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDAAMGPLRDLGDKL--LETEREMIRPIG 862          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.737e-35
Identity = 78/152 (51.32%), Postives = 108/152 (71.05%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGH--NDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            KW G+S  +V  LF++AR  APSIIFIDEID+L GQRG   E EASRR+K+E LVQM G  +  + ++V VLAATN P+ LD+A+RRRF+KRI+IPLPD+ AR+ + +  +  TP S  E +++ LA +TEGFSG+D+    + A    +R+
Sbjct:  265 KWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKS-DEINYDDLAARTEGFSGADVVSLCRTAAINVLRR 415          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.737e-35
Identity = 76/156 (48.72%), Postives = 112/156 (71.79%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG------HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  APS IFIDEIDS+C +RG G+E EASRR+K+ELL+QM GV        + + V+VLAATN P+ +D+A+RRR +KRIYIPLP++  R+ + +++L + P +  + D +S+A K +G+SG+DI++  +DA    +R+
Sbjct:  306 KYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLA-DDIDLKSIAEKMDGYSGADITNVCRDASMMAMRR 460          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.471e-34
Identity = 78/168 (46.43%), Postives = 109/168 (64.88%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHN-----------DQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLF 482
            K++GES  LV +LF MA++ +PSIIFIDEIDS+   R + NE+E+SRRIKTELL+Q   +              D +VLVL ATN P+A+D A RRRF +++YIPLPD + R +  K  +    +SL + D+E +   TEGFSGSD++   K+A  EP+R   D ++F
Sbjct:  543 KYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSD-NENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMF 709          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.277e-34
Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG  +E EASRR+K+ELL+QM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K+ L +      +   E +A KTEG+SG+DI++  +DA    +R+
Sbjct:  278 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELD-PDIHLEDIAEKTEGYSGADITNICRDASLMAMRR 432          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_DANRE (Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio GN=katnal1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.277e-34
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQK------VLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+CG+RG  +E EASRR+K+ELLVQM GVG   +       V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +   + ++ D    A K EG+SG+DI++  +DA    +R+
Sbjct:  278 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVGGAQESEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVDVA-SDVDLTVFAEKIEGYSGADITNVCRDASMMAMRR 432          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 4.279e-34
Identity = 75/157 (47.77%), Postives = 108/157 (68.79%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGH-------NDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            KW GES  +V  LF +AR  APS IFIDEIDSLC  RG   E E+SRR+K+ELLVQ+ GV +       + + V+VLAATN P+ +D+A+RRR +KRIYIPLPD ++R+ +  ++L  T    ++ + E +AR+TEG+SG D+++  +DA    +R+
Sbjct:  311 KWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKALININL-RTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRR 466          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.589e-34
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + +++L +      + D  ++A K EG+SG+DI++  +DA    +R+
Sbjct:  282 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLREL-ELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRR 436          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.589e-34
Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG  +E EASRR+K+ELL+QM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K+ L +      +   E +A KTEG+SG+DI++  +DA    +R+
Sbjct:  278 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELD-PDVHLEDIADKTEGYSGADITNICRDASLMAMRR 432          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.299e-34
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG  +E EASRR+K+ELL+QM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +      +   E +A K EG+SG+DI++  +DA    +R+
Sbjct:  280 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELD-PDIQLEDIAEKIEGYSGADITNVCRDASLMAMRR 434          
The following BLAST results are available for this feature:
BLAST of EY685053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
SAP1_YEAST5.971e-3645.74Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 P... [more]
MEI1_CAEEL1.737e-3551.32Meiotic spindle formation protein mei-1 OS=Caenorh... [more]
KTNA1_STRPU1.737e-3548.72Katanin p60 ATPase-containing subunit OS=Strongylo... [more]
TBP6_YEAST1.471e-3446.43Probable 26S protease subunit YTA6 OS=Saccharomyce... [more]
KATL1_RAT3.277e-3450.64Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_DANRE3.277e-3450.00Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KTNA1_ARATH4.279e-3447.77Katanin p60 ATPase-containing subunit OS=Arabidops... [more]
KTNA1_CHICK5.589e-3450.00Katanin p60 ATPase-containing subunit A1 OS=Gallus... [more]
KATL1_MOUSE5.589e-3450.64Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_PAPAN7.299e-3450.00Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685053 ID=EY685053; Name=EY685053; organism=Citrus sinensis; type=EST; length=996bp
CCACGCGTCCGAAGTGGATGGGTGAAAGTGCCCATCTTGTCTCAAGCCTT
TTCCAGATGGCTCGTGAAAGTGCTCCTTCCATTATTTTTATTGATGAAAT
AGATTCCTTATGTGGTCAGCGTGGAGAAGGCAATGAGAGCGAAGCTTCTC
GGCGCATCAAAACTGAACTTCTTGTACAGATGCAGGGTGTTGGACACAAC
GATCAGAAAGTTCTTGTTCTTGCTGCAACAAATACTCCCTATGCTCTAGA
TCAGGCCATCCGGCGACGTTTTGACAAGCGTATATACATCCCTCTTCCAG
ATTTGAAGGCAAGACAGCACATGTTCAAGGTGCATTTAGGAGATACACCC
CACAGTTTGACTGAAAGTGATTTTGAAAGTTTAGCTCGCAAGACCGAGGG
GTTTTCTGGTTCTGATATTTCCGATTGTGTAAAGGATGCCTTGTTCGAAC
CTGTACGGAAGACTCAAGATGCCATGCTTTTTCTTACAACCTCTACTGGT
ATGACAATGCCTTGGGGCCCTAACTACCTGACCGGTCGTGTCTACCATAC
AGGCCCCAAACACGACCCGCAAACGCCAGAAAACTCCCCCCGTCCGCGTC
CATATTCCCTGAACCCTGCGGGGGCACGCGCGAGTCATAGCTCGAATGAA
GCAGCTGTTCTACACGCAGCTGGCTCCGCTAACCCACTTCCCACCCGCTA
CCCGGAACGCACGCCTAAACACACTCGAGCCTTTTAACACTCTAACCTGT
TTAGTACGCATGGCACCTCACTACAATGCCCTTCACGCCTGTTTCCCACC
TCTAGATAACCCTACTTCCTAAAGTACAGTGCTACTCTCTTCTCTTCACT
CGCTACCCAGCACACGAAGGGAATGCACCCTCGTGCATATAAACCTGCAG
CCCCAAGAAGTACAGAAGCCATAACTGACCCTGGAACAAAAACGCGAGAA
CCTCACAACTCAAGGAACAACCTCCGACCAGCAAAACACACATCAA
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