EY685053

Overview
NameEY685053
Unique NameEY685053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 7.835e-20
Identity = 58/154 (37.66%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRG--EGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKT 464
            W GES   V  +F  AR +AP ++F DE+DS+   RG   G+   A+ R+  ++L +M G+ +  + V ++ ATN P  +D A+ R  R D+ IYIPLPD  +R  +FK  L  TP S  + D   LA+ T GFSG+D+++  + A    +R++
Sbjct:  556 WFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGM-NAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLS-ADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707          

HSP 2 Score: 84.7297 bits (208), Expect = 8.964e-16
Identity = 51/155 (32.90%), Postives = 86/155 (55.48%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQD 470
            K  GES   +   F    +++P+I+FIDEID++  +R E    E  +RI ++LL  M G+      V+V+AATN P ++D A+RR  RFD+ I I +PD   R  + ++H  +      + D E +A +  GF G+D++    +A  + +R+  +
Sbjct:  282 KMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR-EKAHGEVEKRIVSQLLTLMDGL-KTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLG-EDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 7.835e-20
Identity = 57/155 (36.77%), Postives = 92/155 (59.35%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQD 470
            K  GES   +   F+ A ++AP+IIFIDEIDS+  +R + N  E  RR+ ++LL  M G+      V+V+AATN P ++D A+RR  RFD+ + I +PD   R  + ++H  +   +  + D E+LA +T G+ G+DI+    +A  + +R+  D
Sbjct:  287 KMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKAR-SNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLA-DDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMD 438          

HSP 2 Score: 95.1301 bits (235), Expect = 6.633e-19
Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDA 473
            W GES   +  +F  AR +AP+++F+DE+DS+   RG   G+   AS R+  +LL +M G+ +  + V V+ ATN P  +D AI R  R D+ IY+PLPD  AR  +    L  TP      +  ++A+ T+GFSG+D+   V+ A    ++ + +A
Sbjct:  561 WYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGM-NAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLE-PGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEA 715          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.835e-20
Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKT--ELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTES-DFESLARK----TEGFSGSDISDCVKDALFEPVRKTQDAM 476
            ++G     V  LF +AR++AP I+FIDEID++  +RG GN    S +  T  +LLV+M G  +    V++LA TN P  LD A+ R  RFD++I+I  PD+K R  +FKVHL   P  L  + + + LARK    T GFSG+D+++   +A     R   DA+
Sbjct:  380 FVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGF-NTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHL--RPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAI 539          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.023e-19
Identity = 63/155 (40.65%), Postives = 90/155 (58.06%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGE---GNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K++GE A LV  LF++A+E AP+IIFIDEID++  +R +   G E E +R +  +LL +M G       V V+AATN P  LD A+ R  RFD+ I +PLPD + R  + KVH       L   D  ++A  TEG SG+D+     +A    +R+
Sbjct:  213 KYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTL-MQLLAEMDGFDPRG-NVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVH--TRRMKLKGVDLRAIAEMTEGASGADLKAIATEAGMFAIRE 363          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.023e-19
Identity = 58/160 (36.25%), Postives = 98/160 (61.25%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQR-GEGNESEAS-RRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAML 479
            K++GESA ++  +F  A+E  P +IF+DEID++ G+R  EG  ++   +R   ELL QM G  +  Q  +++ ATN P  LD A+ R  R D++I IPLP+   R  + K+HL +      E D+E+L + T+G +G+D+ + V +A F  +++ +D ++
Sbjct:  205 KYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIM-ATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHL-EKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVI 362          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.023e-19
Identity = 58/161 (36.02%), Postives = 95/161 (59.01%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKT--ELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLFL 485
            ++G  A  V  LF+ A+E+AP +IFIDEID++  QRG G       R +T  +LL +M G   N   ++++AATN P  LD A+ R  RFD+++ +  PD   R+ + +VH  +   +  E   +S+AR+T GFSG+D+++ + +A     R+ + A+  L
Sbjct:  245 FVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGN-TGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLA-PEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLL 403          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.336e-19
Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGE---GNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDA 440
            K++GE A LV  LF+MA+E AP+IIFIDEID++  +R +   G E E +R +  +LL +M G       V V+AATN P  LD A+ R  RFD+ I +PLPD + R  + KVH      +L   D   +A  TEG SG+D+     +A
Sbjct:  211 KFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTL-MQLLAEMDGFDPRG-NVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVH--TRKMNLRNVDLSIIADITEGASGADLKAIATEA 354          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.745e-19
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQR---GEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVR 458
            K++GE A +V  LF+MA+  APSIIFIDEID++  +R   G   E E  R +  +LL ++ G    D  V ++AATN    LD A+ R  RFD+ I +PLPD K R  +F ++L          + E L++ TEGFSG+DI +   +A +  +R
Sbjct:  207 KFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTL-MQLLAELDGFDPLD-NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIE-DNINLELLSQLTEGFSGADIKNVCVEAAYMAIR 357          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.745e-19
Identity = 63/163 (38.65%), Postives = 98/163 (60.12%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQR-GEGNESEAS-RRIKTELLVQMQGVGHNDQ--KVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHL-GDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAML 479
            K++GESA L+  +F  ARE  P IIF+DEID++ G+R  EG  ++   +R   ELL Q+ G    DQ  KV ++ ATN P  LD A+ R  R D++I IPLP+ ++R  + K+H  G   H   E D+E++ +  EGF+G+D+ +   +A    +R  +D ++
Sbjct:  212 KYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF---DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHG--EIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVI 369          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.745e-19
Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKT--ELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTES-DFESLARK----TEGFSGSDISDCVKDALFEPVRKTQDAM 476
            ++G     V  LF +AR++AP I+FIDEID++  +RG GN    S +  T  +LLV+M G  +    V++LA TN P  LD A+ R  RFD++I+I  PD+K R  +FKVHL   P  L  + + + LARK    T GFSG+D+++   +A     R   D++
Sbjct:  381 FVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGF-NTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHL--RPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSI 540          
The following BLAST results are available for this feature:
BLAST of EY685053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
TERA2_CAEEL7.835e-2037.66Transitional endoplasmic reticulum ATPase homolog ... [more]
CDC48_YEAST7.835e-2036.77Cell division control protein 48 OS=Saccharomyces ... [more]
AFG32_MOUSE7.835e-2040.49AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1... [more]
PSMR_PYRHO1.023e-1940.65Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PRS10_SCHPO1.023e-1936.25Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]
FTSH1_SYNY31.023e-1936.02Cell division protease ftsH homolog 1 OS=Synechocy... [more]
PSMR_THEGJ1.336e-1942.57Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_SULSO1.745e-1940.26Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PS10B_ARATH1.745e-1938.6526S protease regulatory subunit S10B homolog B OS=... [more]
AFG32_HUMAN1.745e-1939.88AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685053 ID=EY685053; Name=EY685053; organism=Citrus sinensis; type=EST; length=996bp
CCACGCGTCCGAAGTGGATGGGTGAAAGTGCCCATCTTGTCTCAAGCCTT
TTCCAGATGGCTCGTGAAAGTGCTCCTTCCATTATTTTTATTGATGAAAT
AGATTCCTTATGTGGTCAGCGTGGAGAAGGCAATGAGAGCGAAGCTTCTC
GGCGCATCAAAACTGAACTTCTTGTACAGATGCAGGGTGTTGGACACAAC
GATCAGAAAGTTCTTGTTCTTGCTGCAACAAATACTCCCTATGCTCTAGA
TCAGGCCATCCGGCGACGTTTTGACAAGCGTATATACATCCCTCTTCCAG
ATTTGAAGGCAAGACAGCACATGTTCAAGGTGCATTTAGGAGATACACCC
CACAGTTTGACTGAAAGTGATTTTGAAAGTTTAGCTCGCAAGACCGAGGG
GTTTTCTGGTTCTGATATTTCCGATTGTGTAAAGGATGCCTTGTTCGAAC
CTGTACGGAAGACTCAAGATGCCATGCTTTTTCTTACAACCTCTACTGGT
ATGACAATGCCTTGGGGCCCTAACTACCTGACCGGTCGTGTCTACCATAC
AGGCCCCAAACACGACCCGCAAACGCCAGAAAACTCCCCCCGTCCGCGTC
CATATTCCCTGAACCCTGCGGGGGCACGCGCGAGTCATAGCTCGAATGAA
GCAGCTGTTCTACACGCAGCTGGCTCCGCTAACCCACTTCCCACCCGCTA
CCCGGAACGCACGCCTAAACACACTCGAGCCTTTTAACACTCTAACCTGT
TTAGTACGCATGGCACCTCACTACAATGCCCTTCACGCCTGTTTCCCACC
TCTAGATAACCCTACTTCCTAAAGTACAGTGCTACTCTCTTCTCTTCACT
CGCTACCCAGCACACGAAGGGAATGCACCCTCGTGCATATAAACCTGCAG
CCCCAAGAAGTACAGAAGCCATAACTGACCCTGGAACAAAAACGCGAGAA
CCTCACAACTCAAGGAACAACCTCCGACCAGCAAAACACACATCAA
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