EY685053

Overview
NameEY685053
Unique NameEY685053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.888e-19
Identity = 60/158 (37.97%), Postives = 95/158 (60.13%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQR-GEGNESEAS-RRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGD-TPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQD 470
            K++GESA L+  +F  AR+  P IIF+DEID++ G+R  EG  ++   +R   ELL QM G      +V ++ ATN P  LD A+ R  R D++I+I LP+ +AR  + K+H G  T H   E D+E++ + ++GF+G+D+ +   +A    +R   D
Sbjct:  206 KYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHG--EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.888e-19
Identity = 60/158 (37.97%), Postives = 95/158 (60.13%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQR-GEGNESEAS-RRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGD-TPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQD 470
            K++GESA L+  +F  AR+  P IIF+DEID++ G+R  EG  ++   +R   ELL QM G      +V ++ ATN P  LD A+ R  R D++I+I LP+ +AR  + K+H G  T H   E D+E++ + ++GF+G+D+ +   +A    +R   D
Sbjct:  206 KYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHG--EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.888e-19
Identity = 60/158 (37.97%), Postives = 95/158 (60.13%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQR-GEGNESEAS-RRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGD-TPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQD 470
            K++GESA L+  +F  AR+  P IIF+DEID++ G+R  EG  ++   +R   ELL QM G      +V ++ ATN P  LD A+ R  R D++I+I LP+ +AR  + K+H G  T H   E D+E++ + ++GF+G+D+ +   +A    +R   D
Sbjct:  206 KYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHG--EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.888e-19
Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEG---NESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQ 467
            ++G  A  V  LF +A++ APSIIFIDEID++   R  G   + ++   +   +LL +M G G  +  V+VLAATN P  LD A+ R  RFD+++ +  PD K R  + KVH+     +  + D + +A+ T G +G+D+++ + +A     R  Q
Sbjct:  249 FVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLA-NDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQ 403          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: YEJJ_SCHPO (Uncharacterized AAA domain-containing protein C31G5.19 OS=Schizosaccharomyces pombe GN=SPAC31G5.19 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.079e-19
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKT 464
            KW+GE+   +  LF+ A+ + PSIIF DEID L   R    E   +  + T LL  M G+    Q V+++ ATN P A+D A+RR  RFD+  Y PLPD  AR+ + ++H  +    + E     LA K++G+ G+D+     +A    +++T
Sbjct:  344 KWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVST-LLALMDGMESRGQ-VIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRT 494          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.633e-19
Identity = 57/155 (36.77%), Postives = 96/155 (61.94%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKT--ELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQ 467
            ++G  A  V SLF+ A+++AP+IIFIDEID++  QRG G       R +T  +LL++M G   N + ++V+AATN    LD A+ R  RFD+++ +  PD+K R+ + KVH  + P +  + D + +A++T GF G+D+ + + +A     R+ +
Sbjct:  260 FVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGN-EGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLA-EDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNK 412          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 6.633e-19
Identity = 57/155 (36.77%), Postives = 96/155 (61.94%), Query Frame = 3
Query:   15 WMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKT--ELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQ 467
            ++G  A  V SLF+ A+++AP+IIFIDEID++  QRG G       R +T  +LL++M G   N + ++V+AATN    LD A+ R  RFD+++ +  PD+K R+ + KVH  + P +  + D + +A++T GF G+D+ + + +A     R+ +
Sbjct:  260 FVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGN-EGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLA-EDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNK 412          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: YHI5_SCHPO (Uncharacterized AAA domain-containing protein P22H7.05c OS=Schizosaccharomyces pombe GN=SPBP22H7.05c PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.663e-19
Identity = 59/153 (38.56%), Postives = 81/153 (52.94%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKT 464
            KW+GE+   +  LF+ AR   PSIIF DEID L   R    E   S  + T LL  M G+    Q V+V+ ATN P  LD A+RR  RFD+  Y PLP+ +AR  + +++       + ES    LA  T G+ G+D+     +A    VR+T
Sbjct:  450 KWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVST-LLALMDGLDTRGQ-VVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVRRT 600          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: TBP7_YEAST (TAT-binding homolog 7 OS=Saccharomyces cerevisiae GN=YTA7 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 8.663e-19
Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDI-SDCVKDAL------FEPVRKTQDAML 479
            KW+GE+   +  LF+ A++  PSIIF DEID L   R    E   +  + T LL  M G+ +  Q V+V+ ATN P A+D A+RR  RFD+  Y PLPD+KAR  + ++        L+ +  + LA  T+G+ G+D+ S C + AL      F  + ++ D +L
Sbjct:  491 KWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVST-LLALMDGMDNRGQ-VIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQIYRSNDKLL 653          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.663e-19
Identity = 60/154 (38.96%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQR---GEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVR 458
            K++GE A +V  LF+MA+  APSIIFIDEID++  +R   G   E E  R +  +LL ++ G    D  V ++AATN    LD A+ R  RFD+ I +PLPD + R  +F ++L          + E L++ +EGFSG+DI +   +A +  +R
Sbjct:  207 KFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTL-MQLLAELDGFNPLD-NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVE-DNINLELLSQLSEGFSGADIKNVCVEAAYMAIR 357          
The following BLAST results are available for this feature:
BLAST of EY685053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
PRS10_SPETR3.888e-1937.9726S protease regulatory subunit S10B OS=Spermophil... [more]
PRS10_MOUSE3.888e-1937.9726S protease regulatory subunit S10B OS=Mus muscul... [more]
PRS10_HUMAN3.888e-1937.9726S protease regulatory subunit S10B OS=Homo sapie... [more]
FTSH_HELFE3.888e-1935.26Cell division protease ftsH homolog OS=Helicobacte... [more]
YEJJ_SCHPO5.079e-1935.95Uncharacterized AAA domain-containing protein C31G... [more]
FTSH_STRR66.633e-1936.77Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN6.633e-1936.77Cell division protease ftsH homolog OS=Streptococc... [more]
YHI5_SCHPO8.663e-1938.56Uncharacterized AAA domain-containing protein P22H... [more]
TBP7_YEAST8.663e-1936.97TAT-binding homolog 7 OS=Saccharomyces cerevisiae ... [more]
PSMR_SULIY8.663e-1938.96Proteasome-activating nucleotidase OS=Sulfolobus i... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685053 ID=EY685053; Name=EY685053; organism=Citrus sinensis; type=EST; length=996bp
CCACGCGTCCGAAGTGGATGGGTGAAAGTGCCCATCTTGTCTCAAGCCTT
TTCCAGATGGCTCGTGAAAGTGCTCCTTCCATTATTTTTATTGATGAAAT
AGATTCCTTATGTGGTCAGCGTGGAGAAGGCAATGAGAGCGAAGCTTCTC
GGCGCATCAAAACTGAACTTCTTGTACAGATGCAGGGTGTTGGACACAAC
GATCAGAAAGTTCTTGTTCTTGCTGCAACAAATACTCCCTATGCTCTAGA
TCAGGCCATCCGGCGACGTTTTGACAAGCGTATATACATCCCTCTTCCAG
ATTTGAAGGCAAGACAGCACATGTTCAAGGTGCATTTAGGAGATACACCC
CACAGTTTGACTGAAAGTGATTTTGAAAGTTTAGCTCGCAAGACCGAGGG
GTTTTCTGGTTCTGATATTTCCGATTGTGTAAAGGATGCCTTGTTCGAAC
CTGTACGGAAGACTCAAGATGCCATGCTTTTTCTTACAACCTCTACTGGT
ATGACAATGCCTTGGGGCCCTAACTACCTGACCGGTCGTGTCTACCATAC
AGGCCCCAAACACGACCCGCAAACGCCAGAAAACTCCCCCCGTCCGCGTC
CATATTCCCTGAACCCTGCGGGGGCACGCGCGAGTCATAGCTCGAATGAA
GCAGCTGTTCTACACGCAGCTGGCTCCGCTAACCCACTTCCCACCCGCTA
CCCGGAACGCACGCCTAAACACACTCGAGCCTTTTAACACTCTAACCTGT
TTAGTACGCATGGCACCTCACTACAATGCCCTTCACGCCTGTTTCCCACC
TCTAGATAACCCTACTTCCTAAAGTACAGTGCTACTCTCTTCTCTTCACT
CGCTACCCAGCACACGAAGGGAATGCACCCTCGTGCATATAAACCTGCAG
CCCCAAGAAGTACAGAAGCCATAACTGACCCTGGAACAAAAACGCGAGAA
CCTCACAACTCAAGGAACAACCTCCGACCAGCAAAACACACATCAA
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