EY685053

Overview
NameEY685053
Unique NameEY685053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.299e-34
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG  +E EASRR+K+ELL+QM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +      +   E +A K EG+SG+DI++  +DA    +R+
Sbjct:  280 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELD-PDIQLEDIAEKIEGYSGADITNVCRDASLMAMRR 434          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.299e-34
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG  +E EASRR+K+ELL+QM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +      +   E +A K EG+SG+DI++  +DA    +R+
Sbjct:  280 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELD-PDIQLEDIAEKIEGYSGADITNVCRDASLMAMRR 434          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.533e-34
Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGE-GNESEASRRIKTELLVQMQGV---------GHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLFLTTSTGMTMPWGPNY 527
            K++G+S  LV +LF++A+    S+IF+DEIDS+   R + GNE E+SRR+KTE L+Q   +         GH+  +VLVLAATN P+ +D+A RRRF KR YIPLP+ + R       L +  H LTE D E L   TEG+SGSDI+   KDA   P+R   DA+  LTTS  M  P   N+
Sbjct:  451 KYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSP-RVLVLAATNLPWCIDEAARRRFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLRNLGDAL--LTTSAEMIPPISLNH 629          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.533e-34
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG  +E EASRR+K+ELL+QM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +      +   E +A K EG+SG+DI++  +DA    +R+
Sbjct:  280 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRTDLLKINLREVELD-PDIQLEDIAEKIEGYSGADITNVCRDASLMAMRR 434          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.626e-33
Identity = 79/156 (50.64%), Postives = 106/156 (67.95%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG  +E EASRR+K+ELLVQM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K+ L +      +   E +A K EG+SG+DI++  +DA    +R+
Sbjct:  280 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELD-PDIRLEDIAEKIEGYSGADITNVCRDASLMAMRR 434          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.623e-33
Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  +P+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + ++ L +      + D  S+A   EG+SG+DI++  +DA    +R+
Sbjct:  281 KYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRR 435          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.623e-33
Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND---QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  +P+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND   + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + ++ L +      + D  S+A   EG+SG+DI++  +DA    +R+
Sbjct:  281 KYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRR 435          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.623e-33
Identity = 77/155 (49.68%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG---HND--QKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG    ND  + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + K++L +   +  + + + +A + EG+SG+DI++  +DA    +R+
Sbjct:  276 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVDLLKINLKELDLA-NDVNMDKIAEQMEGYSGADITNVCRDASLMAMRR 429          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.070e-33
Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG------HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG         + V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R  + +++L +      + D   +A ++EG+SG+DI++  +DA    +R+
Sbjct:  276 KYRGESEKLVRILFEMARFYAPTTIFIDEIDSMCSRRGTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVELLRINLKEL-ELANDVDMAKIAEQSEGYSGADITNVCRDASLMAMRR 430          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.377e-32
Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQK------VLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K+ GES  LV  LF+MAR  AP+ IFIDEIDS+C +RG   E EASRR+K ELLVQM GVG   +       V+VLAATN P+ +D+A+RRR +KRIYIPLP  K R+ + +++L +      + + E +A   +G+SG+DI++  +DA    +R+
Sbjct:  282 KYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKEL-ELADDVNIECIAENMDGYSGADITNVCRDASLMAMRR 436          
The following BLAST results are available for this feature:
BLAST of EY685053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
KATL1_OTOGA7.299e-3450.00Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_HUMAN7.299e-3450.00Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
SUR2_SCHPO9.533e-3446.15Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 ... [more]
KATL1_SORAR9.533e-3450.00Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_RABIT1.626e-3350.64Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KTNA1_MACFA3.623e-3349.36Katanin p60 ATPase-containing subunit A1 OS=Macaca... [more]
KTNA1_HUMAN3.623e-3349.36Katanin p60 ATPase-containing subunit A1 OS=Homo s... [more]
KTNA1_DANRE3.623e-3349.68Katanin p60 ATPase-containing subunit A1 OS=Danio ... [more]
KTNA1_SALSA8.070e-3348.08Katanin p60 ATPase-containing subunit A1 OS=Salmo ... [more]
KTNA1_XENTR1.377e-3247.44Katanin p60 ATPase-containing subunit A1 OS=Xenopu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685053 ID=EY685053; Name=EY685053; organism=Citrus sinensis; type=EST; length=996bp
CCACGCGTCCGAAGTGGATGGGTGAAAGTGCCCATCTTGTCTCAAGCCTT
TTCCAGATGGCTCGTGAAAGTGCTCCTTCCATTATTTTTATTGATGAAAT
AGATTCCTTATGTGGTCAGCGTGGAGAAGGCAATGAGAGCGAAGCTTCTC
GGCGCATCAAAACTGAACTTCTTGTACAGATGCAGGGTGTTGGACACAAC
GATCAGAAAGTTCTTGTTCTTGCTGCAACAAATACTCCCTATGCTCTAGA
TCAGGCCATCCGGCGACGTTTTGACAAGCGTATATACATCCCTCTTCCAG
ATTTGAAGGCAAGACAGCACATGTTCAAGGTGCATTTAGGAGATACACCC
CACAGTTTGACTGAAAGTGATTTTGAAAGTTTAGCTCGCAAGACCGAGGG
GTTTTCTGGTTCTGATATTTCCGATTGTGTAAAGGATGCCTTGTTCGAAC
CTGTACGGAAGACTCAAGATGCCATGCTTTTTCTTACAACCTCTACTGGT
ATGACAATGCCTTGGGGCCCTAACTACCTGACCGGTCGTGTCTACCATAC
AGGCCCCAAACACGACCCGCAAACGCCAGAAAACTCCCCCCGTCCGCGTC
CATATTCCCTGAACCCTGCGGGGGCACGCGCGAGTCATAGCTCGAATGAA
GCAGCTGTTCTACACGCAGCTGGCTCCGCTAACCCACTTCCCACCCGCTA
CCCGGAACGCACGCCTAAACACACTCGAGCCTTTTAACACTCTAACCTGT
TTAGTACGCATGGCACCTCACTACAATGCCCTTCACGCCTGTTTCCCACC
TCTAGATAACCCTACTTCCTAAAGTACAGTGCTACTCTCTTCTCTTCACT
CGCTACCCAGCACACGAAGGGAATGCACCCTCGTGCATATAAACCTGCAG
CCCCAAGAAGTACAGAAGCCATAACTGACCCTGGAACAAAAACGCGAGAA
CCTCACAACTCAAGGAACAACCTCCGACCAGCAAAACACACATCAA
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