EY685053

Overview
NameEY685053
Unique NameEY685053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 2.870e-30
Identity = 76/162 (46.91%), Postives = 102/162 (62.96%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRG--EGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSL-----TESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAM 476
            KW G+S  LV  LF++AR  APS IF+DE++S+  QRG   G E E S R+KTELLVQM G+  ++  V VLAA+N P+ LD A+ RR +KRI + LP  +ARQ M    L     S      TE ++  L+++TEG+SGSDI    ++A   PVRK  DA+
Sbjct:  326 KWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFDAL 487          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 3.749e-30
Identity = 68/155 (43.87%), Postives = 102/155 (65.81%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG-HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDA 473
            KW+GE   +V +LF +AR   P++IFIDEIDSL  QRG+G E E+SRRIKTE LVQ+ G    ++ ++LV+ ATN P  +D+A RRR  KR+YIPLP+  AR+ +    +      L+E + E + ++++ FSG+D++   ++A   P+R  Q A
Sbjct:  473 KWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDG-EHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTA 626          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.395e-30
Identity = 68/155 (43.87%), Postives = 102/155 (65.81%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG-HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDA 473
            KW+GE   +V +LF +AR   P++IFIDEIDSL  QRG+G E E+SRRIKTE LVQ+ G    ++ ++LV+ ATN P  +D+A RRR  KR+YIPLP+  AR+ +    +      LT+ + E + ++++GFSG+D++   ++A   P+R    A
Sbjct:  476 KWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDG-EHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIRSLHTA 629          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.425e-29
Identity = 74/162 (45.68%), Postives = 99/162 (61.11%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHN-DQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHL--GDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDAMLFLT 488
            KW+G+S   +  LFQ+AR   PSIIFIDEIDS+  +R E  ++E SRR+KTE LVQ  G   + D ++LV+ ATN PY LD A+ RRF KRI + LPD +AR+ +    L   D    L+ SD   +A  T GFS SD+    K+A   PVR+   + L +T
Sbjct:  341 KWVGDSEKTIRGLFQIARNGQPSIIFIDEIDSILCERSE-KDAEVSRRMKTEFLVQFDGATSSPDDRILVIGATNRPYELDDAVLRRFPKRIMLNLPDTEARKELITNTLKKHDMMDGLSSSDIRYIASNTSGFSNSDLVALCKEAAMVPVREIHRSKLSVT 501          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.861e-29
Identity = 71/152 (46.71%), Postives = 97/152 (63.82%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQ--KVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K++G+   LV +LF +AR   PSIIFIDE+DSL  +R   NE EASRR+KTE LV+  G+  N    +++VLAATN P  LD+A  RRF KR+Y+ LPD++ R+ +    L      L       LA+ TEG+SGSD++   KDA  EP+R+
Sbjct:  579 KYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIRE 729          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.145e-29
Identity = 71/152 (46.71%), Postives = 96/152 (63.16%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQ--KVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K++G+   LV +LF +AR   PSIIFIDE+DSL  +R   NE EASRR+KTE LV+  G+  N    +++VLAATN P  LD+A  RRF KR+Y+ LPD + R+ +    L      L       LA+ TEG+SGSD++   KDA  EP+R+
Sbjct:  574 KYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITEGYSGSDLTALAKDAALEPIRE 724          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.413e-29
Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGH-NDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K++GE   LV +LF +ARE  PSIIFIDE+DSL  +R + NE EA+RR+KTE LV+  G+   ++++VLV+ ATN P  LD A  RRF KR+Y+ LPD   R  + +  L    + L+    + LAR TEG+SGSD++   KDA   P+R+
Sbjct:  446 KYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLSERKD-NEHEATRRLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALRRFTKRVYVTLPDHNTRVILLEKLLKKHNNPLSADKLKYLARLTEGYSGSDLTALAKDAALGPIRE 595          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.413e-29
Identity = 70/152 (46.05%), Postives = 96/152 (63.16%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQ--KVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            K++G+   LV +LF +AR   PSIIFIDE+DSL  +R   NE EASRR+KTE LV+  G+  N    +++VLAATN P  LD+A  RRF KR+Y+ LPD + R+ +    L      L       LA+ T+G+SGSD++   KDA  EP+R+
Sbjct:  567 KYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPIRE 717          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 5.413e-29
Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRG--EGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTP--HSL---TESDFESLARKTEGFSGSDISDCVKDALFEPVRK 461
            KW G+S  LV  LF++AR  APS IF+DE++S+  QRG   G E E S R+KTELLVQM G+  ++  V VLAA+N P+ LD A+ RR +KRI + LP  +ARQ M    L      H+L   T+ ++  L+++TEG+SGSDI    ++A   PVRK
Sbjct:  327 KWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSQEARQAMIYHWLPPVSKNHALELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRPVRK 483          
BLAST of EY685053 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.413e-29
Identity = 66/155 (42.58%), Postives = 102/155 (65.81%), Query Frame = 3
Query:   12 KWMGESAHLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG-HNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISDCVKDALFEPVRKTQDA 473
            KW+GE   +V +LF +AR   P++IFIDEIDSL  QRG+G E E+SRRIKTE LVQ+ G    ++ ++LV+ ATN P  +D+A RRR  KR+YIPLP+  AR+ +    +      L++ + + + ++++GFSG+D++   ++A   P+R    A
Sbjct:  482 KWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDG-EHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVGNLMSKEQCCLSDEETDLVVQQSDGFSGADMTQLCREASLGPIRSLHAA 635          
The following BLAST results are available for this feature:
BLAST of EY685053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
KATL2_HUMAN2.870e-3046.91Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
FIGL1_HUMAN3.749e-3043.87Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 ... [more]
FIGL1_RAT6.395e-3043.87Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fi... [more]
SPAST_CAEBR1.425e-2945.68Probable spastin homolog spas-1 OS=Caenorhabditis ... [more]
SPAST_DROGR1.861e-2946.71Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1[more]
SPAST_DROWI4.145e-2946.71Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1[more]
SPAST_IXOSC5.413e-2947.02Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1[more]
SPAST_DROAN5.413e-2946.05Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1[more]
KATL2_MOUSE5.413e-2947.13Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
FIGL1_MOUSE5.413e-2942.58Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685053 ID=EY685053; Name=EY685053; organism=Citrus sinensis; type=EST; length=996bp
CCACGCGTCCGAAGTGGATGGGTGAAAGTGCCCATCTTGTCTCAAGCCTT
TTCCAGATGGCTCGTGAAAGTGCTCCTTCCATTATTTTTATTGATGAAAT
AGATTCCTTATGTGGTCAGCGTGGAGAAGGCAATGAGAGCGAAGCTTCTC
GGCGCATCAAAACTGAACTTCTTGTACAGATGCAGGGTGTTGGACACAAC
GATCAGAAAGTTCTTGTTCTTGCTGCAACAAATACTCCCTATGCTCTAGA
TCAGGCCATCCGGCGACGTTTTGACAAGCGTATATACATCCCTCTTCCAG
ATTTGAAGGCAAGACAGCACATGTTCAAGGTGCATTTAGGAGATACACCC
CACAGTTTGACTGAAAGTGATTTTGAAAGTTTAGCTCGCAAGACCGAGGG
GTTTTCTGGTTCTGATATTTCCGATTGTGTAAAGGATGCCTTGTTCGAAC
CTGTACGGAAGACTCAAGATGCCATGCTTTTTCTTACAACCTCTACTGGT
ATGACAATGCCTTGGGGCCCTAACTACCTGACCGGTCGTGTCTACCATAC
AGGCCCCAAACACGACCCGCAAACGCCAGAAAACTCCCCCCGTCCGCGTC
CATATTCCCTGAACCCTGCGGGGGCACGCGCGAGTCATAGCTCGAATGAA
GCAGCTGTTCTACACGCAGCTGGCTCCGCTAACCCACTTCCCACCCGCTA
CCCGGAACGCACGCCTAAACACACTCGAGCCTTTTAACACTCTAACCTGT
TTAGTACGCATGGCACCTCACTACAATGCCCTTCACGCCTGTTTCCCACC
TCTAGATAACCCTACTTCCTAAAGTACAGTGCTACTCTCTTCTCTTCACT
CGCTACCCAGCACACGAAGGGAATGCACCCTCGTGCATATAAACCTGCAG
CCCCAAGAAGTACAGAAGCCATAACTGACCCTGGAACAAAAACGCGAGAA
CCTCACAACTCAAGGAACAACCTCCGACCAGCAAAACACACATCAA
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