EY685048

Overview
NameEY685048
Unique NameEY685048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.560e-21
Identity = 65/156 (41.67%), Postives = 87/156 (55.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQLXXXXXXXXXXXXXXXXXXXXXSLLPKWIKGAG-------GEFRGGGQWITNAPPRGGGDSPP 448
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV  KN+LE+YA+N++ TV+DEK+  +      K+K+        + L  NQ                       ++ K  + AG       G F GGG     APP GG  S P
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDE-DKQKILDKCNEIINWLDKNQ---TAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGG-----APPSGGASSGP 640          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 8.567e-21
Identity = 45/65 (69.23%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV  KN+LE+YA+N++ TV+DEK+
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 8.567e-21
Identity = 45/65 (69.23%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV  KN+LE+YA+N++ TV+DEK+
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 8.567e-21
Identity = 45/65 (69.23%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV  KN+LE+YA+N++ TV+DEK+
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 8.567e-21
Identity = 45/65 (69.23%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV  KN+LE+YA+N++ TV+DEK+
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKL 558          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.461e-20
Identity = 44/65 (67.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSKD+I++MVQEAE+YK+EDE ++ +V  KNALE+Y YNI+ TV+DEK+
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKL 561          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.461e-20
Identity = 44/65 (67.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKA+DE  + KV+ KN+LE+Y YN++ TV+DEK+
Sbjct:  501 STGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVEDEKV 565          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.461e-20
Identity = 64/150 (42.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQLXXXXXXXXXXXXXXXXXXXXXSLLPKWIKGAGGEFRGGGQWITNAPPRGGGDSPPV 451
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V  KNALE+YA+N+++ V+DE +  +  S   KKK+          L  N L                     S L    +GAGG   G G +   AP  G G  P +
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKI-SEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRL---YQGAGGP--GAGGFGAQAPKGGSGPGPTI 637          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.909e-20
Identity = 44/65 (67.69%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV  KN+L++YA+N++ TV+DEK+
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLDSYAFNMKATVEDEKL 558          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.909e-20
Identity = 44/65 (67.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSKD+I++MVQEAEKYKAEDE ++ +V  KN+LE+Y YN++ TV+DEK+
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQTVEDEKL 561          
The following BLAST results are available for this feature:
BLAST of EY685048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
HSP7C_HORSE6.560e-2141.67Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_RAT8.567e-2169.23Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_MOUSE8.567e-2169.23Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_CRIGR8.567e-2169.23Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN8.567e-2169.23Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP72_HUMAN1.461e-2067.69Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_HYDMA1.461e-2067.69Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HS71B_BOSMU1.461e-2042.67Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HSP7C_CHICK1.909e-2067.69Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP70_CHICK1.909e-2067.69Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685048 ID=EY685048; Name=EY685048; organism=Citrus sinensis; type=EST; length=474bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAAAAGGTCGAGGGCAAGAATGCCTTGGA
AAACTATGCCTACAATATAAGGAACACTGTCAAGGACGAAAAGATCGGGT
TCCAAACTTGATCCCGCTGACCAAAAAAAAAATTGAGGATGCCATTGATT
AGGGCATTTCATGGGCTTTATTACAACCAACTTGGGTGAGGCCCAATAAT
TTTGAAAAAAAAATGGAAGGGACCTGGAAAAGCTCCTGGAATTCCCTCCC
TTTTGCCAAAATGGATCAAGGGGGCTGGGGGGGAGTTTCGGGGCGGGGGC
CAATGGATAACGAATGCTCCCCCCCGTGGGGGGGGGGACTCCCCGCCCGT
GTCCCCCAAATGCCGACAAAGCGG
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