EY685048

Overview
NameEY685048
Unique NameEY685048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.493e-20
Identity = 44/65 (67.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV  KN LE+YA+N+++TV+DEK+
Sbjct:  492 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKL 556          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.493e-20
Identity = 44/65 (67.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV  KN LE+YA+N+++TV+DEK+
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKL 558          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.493e-20
Identity = 44/65 (67.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV  KN LE+YA+N+++TV+DEK+
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKL 558          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.493e-20
Identity = 64/150 (42.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQLXXXXXXXXXXXXXXXXXXXXXSLLPKWIKGAGGEFRGGGQWITNAPPRGGGDSPPV 451
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V  KNALE+YA+N+++ V+DE +  +  S   KKK+          L  N L                     S L    +GAGG   G G +   AP  G G  P +
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKI-SEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL---YQGAGGP--GAGGFGAQAPKGGSGSGPTI 637          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSKD+I++MVQEAE+YK+EDE ++ +V  KNA+E+Y YNI+ TV+DEK+
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKL 561          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSKD+I++MVQEAE+YK+EDE ++ +V  KNA+E+Y YNI+ TV+DEK+
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKL 561          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSKD+I++MVQEAE+YK+EDE ++ +V  KNA+E+Y YNI+ TV+DEK+
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKL 561          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++NKITITNDKGRLSKD+I++MVQEAE+YK+EDE ++ +V  KNA+E+Y YNI+ TV+DEK+
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKL 561          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20
Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG K KITITNDKGRLSK+EIEKMV +AEK+K +DE+ K +VE KN LENYA+ ++N++KDEK+
Sbjct:  492 STGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKV 556          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20
Identity = 63/150 (42.00%), Postives = 82/150 (54.67%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQLXXXXXXXXXXXXXXXXXXXXXSLLPKWIKGAGGEFRGGGQWITNAPPRGGGDSPPV 451
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V  KNALE+YA+N+++ V+DE +  +  S   KKK+          L  N L                     S L    +GAGG   G G +    P  G G  P +
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKI-SEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRL---YQGAGGP--GAGGFGAQGPKGGSGSGPTI 637          
The following BLAST results are available for this feature:
BLAST of EY685048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
HSP7C_ORYLA2.493e-2067.69Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7C_ICTPU2.493e-2067.69Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7C_DANRE2.493e-2067.69Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HS71B_PIG2.493e-2042.67Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HSP72_RAT3.255e-2066.15Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE3.255e-2066.15Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_CAPHI3.255e-2066.15Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN3.255e-2066.15Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HS7C1_DICDI3.255e-2066.15Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HS71B_BOVIN3.255e-2042.00Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685048 ID=EY685048; Name=EY685048; organism=Citrus sinensis; type=EST; length=474bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAAAAGGTCGAGGGCAAGAATGCCTTGGA
AAACTATGCCTACAATATAAGGAACACTGTCAAGGACGAAAAGATCGGGT
TCCAAACTTGATCCCGCTGACCAAAAAAAAAATTGAGGATGCCATTGATT
AGGGCATTTCATGGGCTTTATTACAACCAACTTGGGTGAGGCCCAATAAT
TTTGAAAAAAAAATGGAAGGGACCTGGAAAAGCTCCTGGAATTCCCTCCC
TTTTGCCAAAATGGATCAAGGGGGCTGGGGGGGAGTTTCGGGGCGGGGGC
CAATGGATAACGAATGCTCCCCCCCGTGGGGGGGGGGACTCCCCGCCCGT
GTCCCCCAAATGCCGACAAAGCGG
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