EY685048

Overview
NameEY685048
Unique NameEY685048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.616e-19
Identity = 41/65 (63.08%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            ++G++NKITITNDKGRLSK++IEKMVQEAEKYKA+D+  +++V+ KNALE+YA+N+++ V+DE +
Sbjct:  495 SSGKQNKITITNDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAFNLKSMVEDENV 559          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.110e-19
Identity = 40/65 (61.54%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKI 196
            +TG++N ITITNDKGRLS +EI++MV +AEKYKAEDEE+KK++E +N+LENY Y ++++++D+KI
Sbjct:  507 STGKQNHITITNDKGRLSPEEIDRMVNDAEKYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKI 571          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.110e-19
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQL 283
            +TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  ++K+  KNALE+YA+N+++ V DE +  +  S   KKK+          L  NQL
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKI-SESDKKKILDKCSEVLSWLEANQL 588          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.110e-19
Identity = 44/63 (69.84%), Postives = 57/63 (90.48%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDE 190
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V  KNALE+YA+N+++ V+DE
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVGAKNALESYAFNMKSVVEDE 556          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.756e-19
Identity = 43/63 (68.25%), Postives = 57/63 (90.48%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDE 190
            +TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  +++V  KNALE+YA+N+++ V+DE
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRERVAAKNALESYAFNMKSAVEDE 556          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.756e-19
Identity = 44/63 (69.84%), Postives = 56/63 (88.89%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDE 190
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V  KNALE+YA N+++ V+DE
Sbjct:  491 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYALNMKSAVEDE 553          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 94.3597 bits (233), Expect = 2.756e-19
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQL 283
            +TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  ++K+  KNALE+YA+N+++ V DE +  +  S   KKK+          L  NQL
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKI-SESDKKKILDKCNEVLSWLEANQL 588          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.701e-19
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQL 283
            +TG+ NKITITNDKGRLSK+EIE+MV +AEKYKAEDE  ++K+  KNALE+YA+N+++ V DE +  +  S   KKK+      A   L  NQL
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKI-SDADKKKILNKCNEALSWLEANQL 588          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 4.701e-19
Identity = 43/63 (68.25%), Postives = 56/63 (88.89%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDE 190
            +TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  + +V  KNALE+YA+N+++ V+DE
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDE 556          
BLAST of EY685048 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.019e-19
Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGKNALENYAYNIRNTVKDEKIGFQT*SR*PKKKLRMPLIRAFHGLYYNQ 280
            TG+ NKI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++  KN LE+YAY++RNT+ D K+  +  +   K+KL+  + +    L  NQ
Sbjct:  494 TGKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDAS-DKEKLKTEIDKTVSWLDENQ 584          
The following BLAST results are available for this feature:
BLAST of EY685048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
HSP70_XENLA1.616e-1963.08Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_PLACB2.110e-1961.54Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HS71L_RAT2.110e-1954.26Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71A_PIG2.110e-1969.84Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HSP71_RAT2.756e-1968.25Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP71_CERAE2.756e-1969.84Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HS71L_MOUSE2.756e-1954.26Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HS71L_PIG4.701e-1954.26Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71A_MOUSE4.701e-1968.25Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP72_PARBA8.019e-1951.09Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685048 ID=EY685048; Name=EY685048; organism=Citrus sinensis; type=EST; length=474bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAAAAGGTCGAGGGCAAGAATGCCTTGGA
AAACTATGCCTACAATATAAGGAACACTGTCAAGGACGAAAAGATCGGGT
TCCAAACTTGATCCCGCTGACCAAAAAAAAAATTGAGGATGCCATTGATT
AGGGCATTTCATGGGCTTTATTACAACCAACTTGGGTGAGGCCCAATAAT
TTTGAAAAAAAAATGGAAGGGACCTGGAAAAGCTCCTGGAATTCCCTCCC
TTTTGCCAAAATGGATCAAGGGGGCTGGGGGGGAGTTTCGGGGCGGGGGC
CAATGGATAACGAATGCTCCCCCCCGTGGGGGGGGGGACTCCCCGCCCGT
GTCCCCCAAATGCCGACAAAGCGG
back to top