EY685038

Overview
NameEY685038
Unique NameEY685038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6157 contig Csv1_Contig6157:465..990. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   16 VDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 201
            VDP HNA+R DP++NW+CN VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA W+R N
Sbjct:  135 VDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGV-GKGYRYSQTIGGSRRAAWRRKN 196          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.063e-16
Identity = 41/67 (61.19%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V L+DP H  IR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:   93 VILIDPFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 158          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.164e-15
Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 201
            V L+D  H+AIR DP+INW+C  VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA WKR N
Sbjct:  132 VILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGI-GKGYRYSQTIGGSRRAAWKRKN 196          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.985e-15
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V L+DP H A+R DP   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:  132 VILIDPFHKAVRRDPDAQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_MONAL (60S ribosomal protein L15 OS=Monopterus albus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 2.593e-15
Identity = 42/67 (62.69%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V L+DP H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  132 VILIDPFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_SINKN (60S ribosomal protein L15 OS=Siniperca kneri GN=rpl15 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 3.386e-15
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V L+DP H A+R +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  132 VILIDPFHKAVRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_CYPCA (60S ribosomal protein L15 OS=Cyprinus carpio GN=rpl15 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 5.776e-15
Identity = 42/67 (62.69%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V L+D  H AIR DP   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  132 VVLIDTFHKAIRRDPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_HYDAT (60S ribosomal protein L15 OS=Hydra attenuata GN=RPL15 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14
Identity = 42/67 (62.69%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V LVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  132 VVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_EPICO (60S ribosomal protein L15 OS=Epinephelus coioides GN=rpl15 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14
Identity = 42/67 (62.69%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V LVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  132 VILVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_CARAU (60S ribosomal protein L15 OS=Carassius auratus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 1.681e-14
Identity = 42/67 (62.69%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 204
            V LVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  132 VVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
The following BLAST results are available for this feature:
BLAST of EY685038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RL15_CHITE1.053e-1663.4960S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15_CHICK3.063e-1661.1960S ribosomal protein L15 (Fragment) OS=Gallus gal... [more]
RL15_DROME1.164e-1562.1260S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_ANGJA1.985e-1561.1960S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_MONAL2.593e-1562.6960S ribosomal protein L15 OS=Monopterus albus GN=r... [more]
RL15_SINKN3.386e-1561.1960S ribosomal protein L15 OS=Siniperca kneri GN=rp... [more]
RL15_CYPCA5.776e-1562.6960S ribosomal protein L15 OS=Cyprinus carpio GN=rp... [more]
RL15_HYDAT1.681e-1462.6960S ribosomal protein L15 OS=Hydra attenuata GN=RP... [more]
RL15_EPICO1.681e-1462.6960S ribosomal protein L15 OS=Epinephelus coioides ... [more]
RL15_CARAU1.681e-1462.6960S ribosomal protein L15 OS=Carassius auratus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-H09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685038 ID=EY685038; Name=EY685038; organism=Citrus sinensis; type=EST; length=544bp
CCACGCGTCCGCTTGGTTGATCCTGCTCATAATGCCATCCGTAATGACCC
AAGAATTAATTGGTTATGCAATCCTGTCCATAAGCACAGGGAACTCCGTG
GTCTTACTTCTGCAGGTAAGAAGTACAGAGGCCTACGTGGAAAAGGACAC
TTGCACCACAAGGCTCGGCCTTCGCGCAGGGCTACCTGGAAGAGAAACAA
TACTCTTTCCCTCCGTCGCTACCGTTGATCATTGTTACGGTTTTGATGTT
TATCATCAGTTGAGGGATTTTGTCTGGAGGACATAGTAGTTGCCATTTTG
AGTCTTTTAGAGATTGAAATACTATGGAACATATCTTATTTTGAAACCGT
ACATTCTAAATTAAGACATTTGTGTTTCTTGAGTCTACCTTGAATTATAA
GAGCCTTAAATGTCTCATTCTGTTTAAGGTCTTGTTGAGTATTTGTTTCG
TCACTGCTGTGATTTATCACCTCTTGAACTAGCAGATTTTAAGTTTTGGC
TCGNCAAAAGGAAATCAAATATAAAAAAGAAAAAAAATGGACAG
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