EY685020

Overview
NameEY685020
Unique NameEY685020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 7.589e-47
Identity = 103/181 (56.91%), Postives = 116/181 (64.09%), Query Frame = 1
Query:   43 LLPLTMLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE 585
            LLPL +   V L A   S  A    +    +T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL GM VV+ +E +
Sbjct:    8 LLPLVL--CVGLSALVPSAGASGFRKRGPSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQ 179          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 9.912e-47
Identity = 94/158 (59.49%), Postives = 107/158 (67.72%), Query Frame = 1
Query:  145 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKNKV 618
            V+FD+   G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS+FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM +V  +E  G +NG    K+
Sbjct:    6 VFFDITADGEPLGRVCFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNGKTSKKI 156          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 9.912e-47
Identity = 94/158 (59.49%), Postives = 107/158 (67.72%), Query Frame = 1
Query:  145 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKNKV 618
            V+FD+   G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS+FHRIIP FM Q             SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+
Sbjct:    6 VFFDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKI 156          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 9.912e-47
Identity = 93/162 (57.41%), Postives = 117/162 (72.22%), Query Frame = 1
Query:  130 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE--GRQNGTPK 609
            ++T+K++FD+EI G+ AGRIV+GLFG AVPKT ENF+ L TG KG G       Y+GS FHRIIP+FM+Q             SIYG KF DE+F LKH GPG+LSMANAGP+TNGSQFFI TV T WLD RHVVFG V+ G+DVV ++E++   + + +PK
Sbjct:   79 KVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLDNSPK 233          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.294e-46
Identity = 94/175 (53.71%), Postives = 117/175 (66.86%), Query Frame = 1
Query:  112 SDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE---AEGRQNGTPKNKVRHC 627
            S+ N  ++T KV+FD+E+  +P GRI++GLFGK VPKT ENF+ L  G     K G+   YKGSTFHR+I SFM+Q             SIYGE+FPDENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ GM VV ++E    + R       K+ +C
Sbjct:   23 SEGNGPKVTEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANC 195          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 1.294e-46
Identity = 93/158 (58.86%), Postives = 107/158 (67.72%), Query Frame = 1
Query:  145 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKNKV 618
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG+V  GM +V  +E  G +NG    K+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEAMEHFGSENGKTSKKI 156          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.208e-46
Identity = 102/181 (56.35%), Postives = 117/181 (64.64%), Query Frame = 1
Query:   43 LLPLTMLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE 585
            LLPL +   V L A   S  A+   +    +T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKV+ GM VV+ +E +
Sbjct:    8 LLPLVL--CVGLGALVFSSGAEGFRKRGPSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQ 179          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 2.208e-46
Identity = 93/158 (58.86%), Postives = 107/158 (67.72%), Query Frame = 1
Query:  145 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKNKV 618
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG V  GM++V  +E  G +NG    K+
Sbjct:    6 VFFDIAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAMERFGSRNGKTSKKI 156          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.884e-46
Identity = 100/182 (54.95%), Postives = 117/182 (64.29%), Query Frame = 1
Query:   49 PLTMLWAVVLLATFSSIQAKKSDQNLKE---ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE 585
            P  +L AV+ L   + + +  S    K    +T+KV+FDV I  K  GRIV+GLFG  VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL GM VV+ +E +
Sbjct:    5 PRLLLPAVLCLGLGALVSSSGSSGVRKRGPSVTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQ 179          
BLAST of EY685020 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 6.425e-46
Identity = 93/147 (63.27%), Postives = 107/147 (72.79%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 579
            +V+FDV+I G+  GRIV+ LF   VPKTAENFRALCTGEKG G + GKPLH+KG  FHRII  FM+Q            ESIYGEKF DENF  KH   GLLSMANAGP+TNGSQFFITTV T  LDG+HVVFG+V+ G+ V   +E
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLE 163          
The following BLAST results are available for this feature:
BLAST of EY685020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
PPIC_BOVIN7.589e-4756.91Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIA_RAT9.912e-4759.49Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA_CRIGR9.912e-4759.49Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
CYPB_VICFA9.912e-4757.41Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIB_SCHJA1.294e-4653.71Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIA_RABIT1.294e-4658.86Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
PPIC_HUMAN2.208e-4656.35Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIA_FELCA2.208e-4658.86Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPIC_MOUSE2.884e-4654.95Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPID_MOUSE6.425e-4663.2740 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-F08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685020 ID=EY685020; Name=EY685020; organism=Citrus sinensis; type=EST; length=1001bp
GCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAAATTTGCTTCC
ACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTTCTCTTCAATTC
AGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTAC
TTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTGTAATGGGTCT
CTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCA
CAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCACTACAAGGGA
AGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTT
CACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCC
CTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCTTTTGTCAATG
GCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCATTACAACTGT
GACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGAAAGGTGCTAT
CGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGAGGCAGAATGGC
ACTCCCAAGAACAAAGTCCGTCATTGCAGAACGCCGGTGAACTTCCTCTG
TGATTTCCCCCTAATTATATATTACCCTTTTCCCCCTTTTTAATCCCTCT
CGTCTTTTCCAACTTCCGTGAAAAATACTCTTAATTTTGGCTAATTTCTC
ATGGACTAGAACATTTTTAAATGGCATAAGCTCGTTTGCCAACGTGTGCG
CCTTTGTTTTGGCGGGGAACTCTTTTCTCAGACCAGAAAGGACAACAGAG
TAGAGGGAGCCGGCCTTCAAGAAGAAGCCCACGTTTATAGACACAGGGGT
TAGAGCGCGCGCTTCCAACTTTTAGCTTGACCGCAACAAATCAAAATGAA
TCTTGATCAGGAGGCCGCCGTCATCTACGCGGACGCCGGCAGACGTGTAC
C
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