EY685018

Overview
NameEY685018
Unique NameEY685018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685018 vs. ExPASy Swiss-Prot
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.283e-11
Identity = 46/170 (27.06%), Postives = 78/170 (45.88%), Query Frame = 2
Query:   11 ANFRAHYEGTGPEIWEQTGGELDAFXXXXXXXXXXXXXSRFLQENNPNIKCFLIDPPGSSLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRLTQNFMMAKLDGAFRGTDREAVEMSRFLVKNDGLFLGSSSAMNCVGAVRVA-QSLGPGHTIVTILCDSGMRHLS 517
            AN + HYE TGPEIW+ TGG++D F              ++L+E NP++K   ++P  S++ +                    P     +G+G   +     +  +D   + +  E++EM++ L   +GL +G SS      A++VA +    G  IV +    G R+LS
Sbjct:  155 ANPKVHYETTGPEIWKGTGGKIDIFVSGIGTGGTITGAGKYLKEQNPDVKLIGLEPVESAVLSG-----------------GKPGPHKIQGLGAGFIPGVLDVNIIDEVVQISSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVAVFPSFGERYLS 307          
BLAST of EY685018 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.283e-11
Identity = 45/170 (26.47%), Postives = 77/170 (45.29%), Query Frame = 2
Query:   11 ANFRAHYEGTGPEIWEQTGGELDAFXXXXXXXXXXXXXSRFLQENNPNIKCFLIDPPGSSLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRLTQNFMMAKLDGAFRGTDREAVEMSRFLVKNDGLFLGSSSAMNCVGAVRVA-QSLGPGHTIVTILCDSGMRHLS 517
            AN + HYE TGPEIW+ T G++D F              ++L+E NPN+K + ++P  S++ +                    P     +GIG   +     +  +D   + +  E+++M+R L   +GL +G SS      A+++A +    G   V +    G R+LS
Sbjct:  152 ANPKIHYETTGPEIWKGTDGKIDGFVSGIGTGGTITGAGKYLKEQNPNVKLYGVEPIESAILSG-----------------GKPGPHKIQGIGAGFIPSVLEVDLIDEVVQVSSDESIDMARLLALKEGLLVGISSGAAAAAAIKLAKRPENAGKLFVAVFPSFGERYLS 304          
BLAST of EY685018 vs. ExPASy Swiss-Prot
Match: MCCA_BACSU (O-acetylserine dependent cystathionine beta-synthase OS=Bacillus subtilis GN=mccA PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.676e-11
Identity = 46/169 (27.22%), Postives = 70/169 (41.42%), Query Frame = 2
Query:   14 NFRAHYEGTGPEIWEQTGGELDAFXXXXXXXXXXXXXSRFLQENNPNIKCFLIDPPGSSLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRLTQNFMMAKLDGAFRGTDREAVEMSRFLVKNDGLFLGSSSAMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSK 520
            N   +Y+  GPE+WE   G +  F             + FL+E NP +K  +++P GS L                      P    TEGIG+  +      +  D  +  TD  A  + +   + +GL +GSSS      A+  A+    G  IVT+  DS  R++SK
Sbjct:  150 NPSTYYKTLGPEMWEALDGNIHTFVAGAGSGGTFAGTASFLKEKNPAVKTVIVEPVGSILNGG------------------EPHAHKTEGIGMEFIPDYMDKSHFDEIYTVTDENAFRLVKEAAEKEGLLIGSSSGAALYAALEEAKKASAGTNIVTVFPDSSDRYISK 300          
BLAST of EY685018 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.676e-11
Identity = 49/170 (28.82%), Postives = 77/170 (45.29%), Query Frame = 2
Query:   11 ANFRAHYEGTGPEIWEQTGGELDAFXXXXXXXXXXXXXSRFLQENNPNIKCFLIDPPGSSLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRLTQNFMMAKLDGAFRGTDREAVEMSRFLVKNDGLFLGSSSAMNCVGAVRVAQ-SLGPGHTIVTILCDSGMRHLS 517
            AN + HYE TGPEIW+ TGG++D                R+L+E NP+IK + ++P  S++ +                    P     +GIG   +     +  ++   + +  EA+EM++ L   +GL +G SS      AVR+AQ     G   V +    G R+LS
Sbjct:  152 ANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGGTITGAGRYLREQNPDIKIYGVEPVESAVLSG-----------------GKPGPHKIQGIGAGFVPGVLDVDLINETVQVSSDEAIEMAKALALKEGLLVGISSGAAAAAAVRLAQRPENEGKLFVVVFPSFGERYLS 304          
BLAST of EY685018 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.189e-11
Identity = 48/170 (28.24%), Postives = 74/170 (43.53%), Query Frame = 2
Query:   11 ANFRAHYEGTGPEIWEQTGGELDAFXXXXXXXXXXXXXSRFLQENNPNIKCFLIDPPGSSLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRLTQNFMMAKLDGAFRGTDREAVEMSRFLVKNDGLFLGSSSAMNCVGAVRVA-QSLGPGHTIVTILCDSGMRHLS 517
            AN + HYE TGPEIWE T G++D                RF++E  P +K   ++P  S++ +                    P     +GIG   + +N  +A +D     +  EA+E S+ L   +GL +G SS      A++VA +    G  I  +    G R+LS
Sbjct:  222 ANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSG-----------------GKPGPHKIQGIGAGFVPKNLDLAIVDEYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGERYLS 374          
BLAST of EY685018 vs. ExPASy Swiss-Prot
Match: CBS_DICDI (Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.876e-11
Identity = 52/182 (28.57%), Postives = 80/182 (43.96%), Query Frame = 2
Query:   11 ANFRAHYEGTGPEIWEQTGGELDAFXXXXXXXXXXXXXSRFLQENNPNIKCFLIDPPGSSLFNKVTRGVMYTKEEAEGRRLKNPFDTIT-EGIGINRLTQNFMMAKLDGAFRGTDREAVEMSRFLVKNDGLFLGSSSAMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSKFYDVHYLSQQG 553
            +N  AHY+GT  E+ EQ  G++D               +R ++E  PN     +DP GS L              A+   L N   +   EGIG + +        +D   +  D+E+  M+R L+K +GL  G SS    VGA+  A+ L  G   V +L DS   +++K  +  +L   G
Sbjct:  181 SNPLAHYDGTAEELLEQCEGKIDMIVCTAGTGGTITGIARKIKERLPNCIVVGVDPHGSIL--------------AQPESLNNTNKSYKIEGIGYDFIPNVLERKLVDQWIKTDDKESFIMARRLIKEEGLLCGGSSGSAMVGALLAAKQLKKGQRCVVLLADSIRNYMTKHLNDDWLVDNG 348          
BLAST of EY685018 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 8.318e-11
Identity = 46/170 (27.06%), Postives = 72/170 (42.35%), Query Frame = 2
Query:   11 ANFRAHYEGTGPEIWEQTGGELDAFXXXXXXXXXXXXXSRFLQENNPNIKCFLIDPPGSSLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRLTQNFMMAKLDGAFRGTDREAVEMSRFLVKNDGLFLGSSSAMNCVGAVRVA-QSLGPGHTIVTILCDSGMRHLS 517
            AN + HYE TGPEIW+ T G++D F              RF++E NP  +   ++P  S + +                    P     +GIG   + +N     +D     +  EA+E ++ L   +GL +G SS      A++VA +    G  I  +    G R+LS
Sbjct:  260 ANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSG-----------------GKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGERYLS 412          
The following BLAST results are available for this feature:
BLAST of EY685018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CYSK_SPIOL1.283e-1127.06Cysteine synthase OS=Spinacia oleracea PE=1 SV=1[more]
CYSK1_BRAJU1.283e-1126.47Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
MCCA_BACSU1.676e-1127.22O-acetylserine dependent cystathionine beta-syntha... [more]
CYSK1_ORYSJ1.676e-1128.82Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSKP_ARATH2.189e-1128.24Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CBS_DICDI4.876e-1128.57Cystathionine beta-synthase OS=Dictyostelium disco... [more]
CYSKM_ARATH8.318e-1127.06Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-F06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685018 ID=EY685018; Name=EY685018; organism=Citrus sinensis; type=EST; length=969bp
CCACGCGTCCGCAAACTTCAGAGCGCACTATGAGGGCACTGGGCCTGAGA
TTTGGGAACAGACTGGTGGTGAATTAGATGCATTTGTTGCGGCTGCGGGC
ACAGGTGGCACTGTGGCTGGGGTTTCCAGGTTTCTCCAGGAAAATAATCC
CAACATCAAATGCTTTCTGATTGATCCTCCTGGTTCTAGTTTGTTTAACA
AGGTAACTAGAGGAGTGATGTACACTAAAGAGGAAGCTGAAGGACGAAGA
TTAAAGAATCCATTTGACACAATAACAGAGGGGATCGGAATTAACAGATT
AACTCAAAATTTTATGATGGCAAAACTTGATGGGGCTTTTCGAGGCACAG
ATAGGGAGGCTGTTGAAATGTCAAGGTTTCTTGTGAAGAATGATGGGCTC
TTTCTTGGGAGCTCTTCAGCAATGAATTGTGTAGGAGCTGTCAGAGTGGC
ACAGTCGCTTGGCCCTGGTCACACAATTGTTACAATTCTGTGTGACAGTG
GAATGAGGCATCTGAGTAAGTTTTATGACGTCCATTATCTGTCTCAGCAG
GGTTTGACACCTGCTGCAGCTGGACTAGAATTCCTTGGCATCAAATGAAA
TTTGAGCATGCCTGAGATCACTGTTCCTGTACATTCCCACCGCTAGAAAA
ACATTTTATTCATCAACATATTATTTTGTGAGAGGGTGGCCTTAGGGGAA
GTGAACTGGAAAATTTTTGCCAATGAAGTTGTTGAGCGGGAACATTGGGG
GGGAAAAAGAACAAATCTTTTTCCTTGGAGGGTGAGAAATTCAAAATGAA
TCCGGAAAATTTTTAATTTTTCATAAGGGTATTTAATTCAAGGCATTAAT
TTTAAAAAGAAGAATTCTTAAAGGAATATTATAGTAATTTTTTATATTCC
CACTTCCTTTTCGGGCATTACAAGGAAACCCACCAAAACCCCTTATTTTT
TTTTGGCAAGGCCAAAATT
back to top