EY684997

Overview
NameEY684997
Unique NameEY684997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 36/109 (33.03%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  207 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            MS+ ++RR M   K M  D     +   + D +  +N    GP E+ +E G +++ ++  + YP K P++ FV++++HPNV   SG +CLD++   WSP +D+  I  S
Sbjct:    1 MSTTARRRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNV-YSSGELCLDILQNRWSPTYDVAAILTS 108          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 36/109 (33.03%), Postives = 63/109 (57.80%), Query Frame = 3
Query:  207 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            MS+PSK+R +   K + +D     +     D L  +N    GP ++ +E G +K+ +   ++YP K P++ F++K++HPNV   +G +CLD++   WSP +D+  I  S
Sbjct:    1 MSTPSKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNV-YANGELCLDILQNRWSPTYDVAAILTS 108          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 3
Query:  279 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            + + L  +     GP +S Y GGV+ + +  P  YP+K P + F  +IYHPN++  +GS+CLD++   WSP   +  +  S
Sbjct:   26 VGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINS-NGSICLDILRDQWSPALTISKVLLS 105          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 3
Query:  222 KRRDMDVMKLMMS-DYNVETI--NDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            KR   ++M LM S D  +     +D L ++    HG   ++YE   +K+ +E P  YPY +P++ F+   YHPNVD   G++CLD++   WS ++D+  I  S
Sbjct:   33 KRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVD-TQGNICLDILKDKWSALYDVRTILLS 134          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 3
Query:  318 GPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            GP ES Y GGV+ + +  P  YP+K P + F  K++HPN++  +GS+CLD++ + WSP   +  +  S
Sbjct:   39 GPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS 105          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 3
Query:  279 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            + + L  +     GP +S Y GGV+ + +  P  YP+K P + F  +IYHPN++  +GS+CLD++   WSP   +  +  S
Sbjct:   26 VGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINS-NGSICLDILRDQWSPALTISKVLLS 105          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 3
Query:  318 GPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSP 491
            GP +S Y GGV+ + ++    YP+K P + F  K+YHPN+D   GS+CLD++ + WSP
Sbjct:   40 GPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDS-KGSICLDILKEQWSP 96          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 3
Query:  318 GPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            GP ES Y GGV+ + +  P  YP+K P + F  K++HPN++  +GS+CLD++ + WSP   +  +  S
Sbjct:   39 GPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS 105          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 27/81 (33.33%), Postives = 47/81 (58.02%), Query Frame = 3
Query:  279 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            + + +  +     GP +S Y+GG + + ++ P  YP+K P + F  +IYHPNV+  +GS+CLD++   WSP   +  +  S
Sbjct:   26 VGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNS-NGSICLDILRSQWSPALTISKVLLS 105          
BLAST of EY684997 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 27/81 (33.33%), Postives = 47/81 (58.02%), Query Frame = 3
Query:  279 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFES 521
            + + +  +     GP +S Y+GG + + ++ P  YP+K P + F  +IYHPNV+  +GS+CLD++   WSP   +  +  S
Sbjct:   26 VGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNS-NGSICLDILRSQWSPALTISKVLLS 105          
The following BLAST results are available for this feature:
BLAST of EY684997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
UBC2_YARLI6.376e-1233.03Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_USTMA1.088e-1133.03Ubiquitin-conjugating enzyme E2 2 OS=Ustilago mayd... [more]
UBC1_MAGGR1.088e-1134.57Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UBE2C_MOUSE1.420e-1134.95Ubiquitin-conjugating enzyme E2 C OS=Mus musculus ... [more]
UBC8_ARATH1.420e-1139.71Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC1_COLGL1.420e-1134.57Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UBC12_ARATH1.420e-1144.83Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]
UBC10_ARATH1.420e-1139.71Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
U2D2B_RAT1.420e-1133.33Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norv... [more]
U2D2B_MOUSE1.420e-1133.33Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684997 ID=EY684997; Name=EY684997; organism=Citrus sinensis; type=EST; length=869bp
AGAAACTCTTTCCTTGACTCAACTCACGAATAGGGTTATTCATTTTCTGG
GAATCTGGATAAGCTTCTACTTGTCACCTGTTCCTTGTTTGAGCATTGGA
CAAAAGTCTGAGGTTTCTGATTCTGTGATATTTGTTTTACTGTCTCATTT
TGCTCGGAGCTTGTGTATCTCTGTTTGGCTGTGATTTAAATTGCATAAAG
ATCAAAATGTCTTCTCCAAGCAAGAGAAGGGATATGGATGTCATGAAGCT
GATGATGAGTGATTACAATGTGGAGACAATAAATGATGGACTGAATGAAT
TTAATGTGGAATTCCATGGTCCAAAAGAAAGCCTTTATGAAGGTGGGGTT
TGGAAAATTCGTGTTGAGCTTCCTGATGCTTATCCATACAAGTCTCCTTC
CATTGGGTTTGTGAACAAGATATACCACCCTAATGTAGATGAAATGTCTG
GTTCTGTATGCTTGGATGTTATTAACCAATCCTGGAGCCCGATGTTTGAT
CTATTAAACATTTTTGAATCTTTTCTTCCTCAACTCCTTCTTTATCCCAA
TCCTTCAAACCCCCTTTATGGTGATGCAGCTTCACTGATGATCAAGGACC
GAAAACCATTATGACCCAAAAGTGAAAAAAGTATTGGTCAAGATCTTCCC
AACAAAAAACTTTTGGTAATTCCCAGGCTTGTGAGGAACATGGACATAAA
GAAATCAATAGAAAAAAAAAGCAATCTACTGATATAACCTTGCTGGCATT
CAAGACCCTTATAAACTTTGCGGGTTTTGGCCCATGTAATAGAAGACATT
AATAAACGGAAACATCGGACTGAACAACGCAATAAAACAACGCCGACCTT
TTTTAGTAAGGACGAACAC
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