EY684993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ESCF3 (Putative multidrug resistance protein mdtD OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mdtD PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.040e-12 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 TAIVLFTLGSLFCALSATLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: HSRA_HAEIN (Probable transport protein hsrA OS=Haemophilus influenzae GN=hsrA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.359e-12 Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = -2 Query: 37 WRSAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASL-APTLGPAVGGWITDISSWHWLFYINLVPG 327 +RSA F L S+ CA A N++S+I R +QG G +M+P V A + KQ+++ A + A A L P LGP +GGW+ +SWHW+F IN+ G Sbjct: 78 FRSAVFTFILGSVACAAASNLESLILARVIQGIGGAFMMP-VARLAIIQAVPKQQLVNAWNLMATAGLIGPILGPILGGWLVIHASWHWIFLINIPIG 174
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SHISS (Putative multidrug resistance protein mdtD OS=Shigella sonnei (strain Ss046) GN=mdtD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A +L+ Sbjct: 80 TAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLLLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SHIBS (Putative multidrug resistance protein mdtD OS=Shigella boydii serotype 4 (strain Sb227) GN=mdtD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A +L+ Sbjct: 80 TAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLLLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SHIB3 (Putative multidrug resistance protein mdtD OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mdtD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A +L+ Sbjct: 80 TAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLLLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SERP5 (Putative multidrug resistance protein mdtD OS=Serratia proteamaculans (strain 568) GN=mdtD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 SA FTL S+LCA + + +IA R +QG G M+P+ T +Q + A + + + P +GPA+GG++ +SWHW+F IN+ G+ A +L+ Sbjct: 81 SAIVLFTLGSILCARSETLNELIASRVVQGIGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLMGPALGGFLVQYASWHWIFLINIPVGIAGAIATLLLM 186
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ECOLI (Putative multidrug resistance protein mdtD OS=Escherichia coli (strain K12) GN=mdtD PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A +L+ Sbjct: 80 TAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLLLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ECOLC (Putative multidrug resistance protein mdtD OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=mdtD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A +L+ Sbjct: 80 TAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLLLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ECOL6 (Putative multidrug resistance protein mdtD OS=Escherichia coli O6 GN=mdtD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ ML+ Sbjct: 80 TAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAITTLMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ECOHS (Putative multidrug resistance protein mdtD OS=Escherichia coli O9:H4 (strain HS) GN=mdtD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ RALQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A +L+ Sbjct: 80 TAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLLLM 185 The following BLAST results are available for this feature:
BLAST of EY684993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684993 ID=EY684993; Name=EY684993; organism=Citrus sinensis; type=EST; length=898bpback to top |