EY684993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALTI (Putative multidrug resistance protein mdtD OS=Salmonella typhi GN=mdtD PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.027e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_PECCP (Putative multidrug resistance protein mdtD OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.027e-12 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SLLCA + + ++A R +QG G M+P+ T Q + A + + + P +GPA+GG++ + +SWHW+F INL G+ A L+ Sbjct: 79 AAILLFTLGSLLCARSETLNELLASRVIQGIGGAMMVPVGRLTVMKIVPRDQYMAAMTFVTLPGQIGPLMGPALGGFLVEYASWHWIFLINLPVGIIGALATWFLM 184
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: EMRB_MYCTU (Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis GN=emrB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = -2 Query: 34 FTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGL 306 FTL SLLCA+A NI +I FR +QGF GG + P+ F K+ + +G L P GP +GGW+ W W+F +NL GL Sbjct: 118 FTLGSLLCAVAPNILLLIIFRVVQGFGGGMLTPVSFAILAREAGPKRLGRVMAVVGIPMLLGPVGGPILGGWLIGAYGWRWIFLVNLPVGL 208
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALTY (Putative multidrug resistance protein mdtD OS=Salmonella typhimurium GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALSV (Putative multidrug resistance protein mdtD OS=Salmonella schwarzengrund (strain CVM19633) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAIATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALPK (Putative multidrug resistance protein mdtD OS=Salmonella paratyphi A (strain AKU_12601) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALPB (Putative multidrug resistance protein mdtD OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALPA (Putative multidrug resistance protein mdtD OS=Salmonella paratyphi A GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALNS (Putative multidrug resistance protein mdtD OS=Salmonella newport (strain SL254) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALHS (Putative multidrug resistance protein mdtD OS=Salmonella heidelberg (strain SL476) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185 The following BLAST results are available for this feature:
BLAST of EY684993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684993 ID=EY684993; Name=EY684993; organism=Citrus sinensis; type=EST; length=898bpback to top |