EY684993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALEP (Putative multidrug resistance protein mdtD OS=Salmonella enteritidis PT4 (strain P125109) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALDC (Putative multidrug resistance protein mdtD OS=Salmonella dublin (strain CT_02021853) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRTQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_SALA4 (Putative multidrug resistance protein mdtD OS=Salmonella agona (strain SL483) GN=mdtD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA++ + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ERWCT (Putative multidrug resistance protein mdtD OS=Erwinia carotovora subsp. atroseptica GN=mdtD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SLLCA + + ++ R +QG G M+P+ T Q + A + + + P LGPA+GG++ + +SWHW+F INL G+ A L+ Sbjct: 79 AAILLFTLGSLLCARSETLDELLISRVIQGIGGAMMVPVGRLTVMKIVPRDQYMAAMTFVTLPGQIGPLLGPALGGFLVEYASWHWIFLINLPVGIIGALATWFLM 184
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ENTS8 (Putative multidrug resistance protein mdtD OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdtD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = -2 Query: 34 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGL 321 +A FTL SL CA + + ++A R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F INL G+ Sbjct: 80 TAIVLFTLGSLFCAQSSTLNELVAARVLQGIGGAMMVPVGRLTVMKIVPRDQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINLPVGI 175
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_CITK8 (Putative multidrug resistance protein mdtD OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.808e-12 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA + + ++ R LQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A ML+ Sbjct: 80 TAIVLFTLGSLFCAWSSTLNELVLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGILVEYASWHWIFLINIPVGIVGAIATLMLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: EMRY_ECOLI (Multidrug resistance protein Y OS=Escherichia coli (strain K12) GN=emrY PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.808e-12 Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = -2 Query: 1 FTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLVK 306 F+L+SL+C+++ N+ +I FR +QG + G +IPL + + ++R A + +AP GP +GG+I D SW W+F IN+ G+ V L+K Sbjct: 93 FSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLK 194
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_ENT38 (Putative multidrug resistance protein mdtD OS=Enterobacter sp. (strain 638) GN=mdtD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FTL SL CA A + ++ R LQG G M+P+ T +Q + A + + + P LGPA+GG + + +SWHW+F INL G+ A L+ Sbjct: 80 TAIVLFTLGSLFCAKADTLNELVMSRVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGILVEYASWHWIFLINLPVGIVGAIATLWLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_YERPS (Putative multidrug resistance protein mdtD OS=Yersinia pseudotuberculosis GN=mdtD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 SA FT SL+CA + + +I R LQG M+P+ T +Q + A + + + P +GPA+GG++ + +SWHW+F INL G+ A +L+ Sbjct: 80 SAIILFTFGSLMCAQSATLNELILSRVLQGVGDAMMVPVGRLTVMKIVPREQYMAAMAFVTLPGQIGPLVGPALGGFLVEFASWHWIFLINLPVGVIGALATLLLM 185
BLAST of EY684993 vs. ExPASy Swiss-Prot
Match: MDTD_KLEP3 (Putative multidrug resistance protein mdtD OS=Klebsiella pneumoniae (strain 342) GN=mdtD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 35/106 (33.02%), Postives = 53/106 (50.00%), Query Frame = -2 Query: 4 SAAARFTLTSLLCAMAWNIQSMIAFRALQGFLGGWMIPLVFTTAFMYFNGKQRVIAASTIGAIASLAPTLGPAVGGWITDISSWHWLFYINLVPGLFVTFAVPMLV 321 +A FT SL CA A + ++ R LQG G M+P+ T Q + A + + + P LGPA+GG + + +SWHW+F IN+ G+ A L+ Sbjct: 80 TAIVLFTAGSLFCAQASTLDQLVMARVLQGIGGAMMVPVGRLTVMKIVPRDQYMAAMTFVTLPGQVGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAIATLCLM 185 The following BLAST results are available for this feature:
BLAST of EY684993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684993 ID=EY684993; Name=EY684993; organism=Citrus sinensis; type=EST; length=898bpback to top |