EY684984

Overview
NameEY684984
Unique NameEY684984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPG (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadI PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.270e-15
Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D+ L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSILAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadI PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 45/102 (44.12%), Postives = 69/102 (67.65%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QGL+ D      I P+   +  DNN+R D+++E+ A L PA+DR++G++TA NSTPLTDGA+ V++ SE+ A E GL  L YLR+   +A++
Sbjct:  209 SHQMAAQAWQQGLLHDEVMTAYIPPFSDAITEDNNIRKDSTMEQYAKLRPAFDRKHGSVTAANSTPLTDGAAAVMMMSESKAKELGLQPLGYLRSFAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO5E (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRGLX-RDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+ L   DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQLLAEDNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRGLX-RDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+ L   DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQLLAEDNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGATAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHIB3 (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = -3
Query:   39 AYKQGLVDDSIS-----PY-RGLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAV 302
            A++ G++ D +      PY + L  DNN+R D++LE+ + L PA+DR++GT+TA NSTPLTDGA+ VL+ SE+ A   GL  L YLR+   +A+
Sbjct:  216 AWESGVLRDEVMTAYVPPYEKALSEDNNVRHDSALEQYSRLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESRAKSLGLTPLGYLRSYAFSAI 309          
The following BLAST results are available for this feature:
BLAST of EY684984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
FADI_YERPG1.270e-1547.063-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_YERE83.695e-1544.123-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADI_ECO5E1.404e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]
FADI_ECO571.404e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]
FADI_SHISS1.834e-1446.883-ketoacyl-CoA thiolase OS=Shigella sonnei (strain... [more]
FADI_SHIFL1.834e-1446.883-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fa... [more]
FADI_SHIF81.834e-1446.883-ketoacyl-CoA thiolase OS=Shigella flexneri serot... [more]
FADI_SHIBS1.834e-1446.883-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]
FADI_SHIB31.834e-1446.883-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]
FADI_PECCP1.834e-1445.743-ketoacyl-CoA thiolase OS=Pectobacterium carotovo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684984 ID=EY684984; Name=EY684984; organism=Citrus sinensis; type=EST; length=883bp
CTTGCAGAACGGGTCCCGGAATTCCGGGTCGACGAATTCACCGCTGCGGT
TTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGGCAGCCC
ATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGGGGCGTG
GAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGGGGACAG
GCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGTCCCGGG
NCAGGCCGCGATACGGGCTGATCGAATCATCGACCAAACCCTGCTTGTAA
GCCGGCGACCACCGCTGGAGACTAACTCAGGGCAAAGAAACCAAACCGCA
CCGAACTACCAACCACCACCCCCCCACACGCCCCAAACCACCCACACACA
CCCGACGGGAGACACACGGCAGAAAACCACCAACAGAGAGGAGGGGGGGG
GGGGGGAGTTCGAAGAAGACGGGTCAGTCCGCAGAACCGCGAAGCACTAA
AGCCAAACGTCTCACGCCGGCCCGCGCCTGCCACGCGACGAGGCACCACC
GACGCGGACCGCCCGCACAACCTGACTTAGAAAAACGAAATCATAAAAGA
CCAATGTATAACGGAAAAGAGGCAAGCGGCACTAGTCCGGCCCCCAGCCC
AGACCGTAAGACACCGTACCACCAAAGCCCCTCGAGCCCCCACCCCTCGG
AGGGGGCGGAAAGACAGACCCGCACCCCACCCCCCGCCCCCTCCGAGAAC
GACAGCCTGTCGGCAAGCCCGGCACCCGCCACCTCCGAACGAGGCCGCGC
TCACAAGGAACCGACAACCACAGGACCGCGCACCCGCCCCGGCGCCCACT
TCCCGAACACCGCCCCCACACGCGACAGGAAAA
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