EY684984

Overview
NameEY684984
Unique NameEY684984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOSE (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain SE11) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOLU (3-ketoacyl-CoA thiolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLAEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadI PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOL6 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLAEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECODH (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12 / DH10B) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOBW (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12 / BW2952) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310
The following BLAST results are available for this feature:
BLAST of EY684984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
FADI_ECOUT1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOSE1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOLU1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O17:K5... [more]
FADI_ECOLI1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOL61.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=... [more]
FADI_ECOL51.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15... [more]
FADI_ECOK11.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 ... [more]
FADI_ECOHS1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 ... [more]
FADI_ECODH1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOBW1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684984 ID=EY684984; Name=EY684984; organism=Citrus sinensis; type=EST; length=883bp
CTTGCAGAACGGGTCCCGGAATTCCGGGTCGACGAATTCACCGCTGCGGT
TTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGGCAGCCC
ATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGGGGCGTG
GAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGGGGACAG
GCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGTCCCGGG
NCAGGCCGCGATACGGGCTGATCGAATCATCGACCAAACCCTGCTTGTAA
GCCGGCGACCACCGCTGGAGACTAACTCAGGGCAAAGAAACCAAACCGCA
CCGAACTACCAACCACCACCCCCCCACACGCCCCAAACCACCCACACACA
CCCGACGGGAGACACACGGCAGAAAACCACCAACAGAGAGGAGGGGGGGG
GGGGGGAGTTCGAAGAAGACGGGTCAGTCCGCAGAACCGCGAAGCACTAA
AGCCAAACGTCTCACGCCGGCCCGCGCCTGCCACGCGACGAGGCACCACC
GACGCGGACCGCCCGCACAACCTGACTTAGAAAAACGAAATCATAAAAGA
CCAATGTATAACGGAAAAGAGGCAAGCGGCACTAGTCCGGCCCCCAGCCC
AGACCGTAAGACACCGTACCACCAAAGCCCCTCGAGCCCCCACCCCTCGG
AGGGGGCGGAAAGACAGACCCGCACCCCACCCCCCGCCCCCTCCGAGAAC
GACAGCCTGTCGGCAAGCCCGGCACCCGCCACCTCCGAACGAGGCCGCGC
TCACAAGGAACCGACAACCACAGGACCGCGCACCCGCCCCGGCGCCCACT
TCCCGAACACCGCCCCCACACGCGACAGGAAAA
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