EY684984

Overview
NameEY684984
Unique NameEY684984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO8A (3-ketoacyl-CoA thiolase OS=Escherichia coli O8 (strain IAI1) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO81 (3-ketoacyl-CoA thiolase OS=Escherichia coli O81 (strain ED1a) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO7I (3-ketoacyl-CoA thiolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO55 (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain 55989 / EAEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO45 (3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO27 (3-ketoacyl-CoA thiolase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.395e-14
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = -3
Query:   39 AYKQGLVDDSI-----SPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAV 302
            A+ +G + D +      PY+  L  DNN+R D+ LE  A L PA+DRQ G++TA NSTPLTDGA+ ++L  E  A E GL ++ Y+R+   AA+
Sbjct:  215 AWAEGKIRDEVMTAFPEPYKKWLDMDNNIRMDSKLESYAKLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAAI 308          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadI PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.395e-14
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = -3
Query:   39 AYKQGLVDDSI-----SPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAV 302
            A+ +G + D +      PY+  L  DNN+R D+ LE  A L PA+DRQ G++TA NSTPLTDGA+ ++L  E  A E GL ++ Y+R+   AA+
Sbjct:  215 AWTEGKIRDEVMTAFPEPYKKWLDMDNNIRMDSKLESYAKLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAAI 308          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.128e-14
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = -3
Query:   39 AYKQGLVDDSI-----SPY-RGLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAV 302
            A+K GL+   +      PY + + +DNN+R D++LE  A L PA+DR+ GT+TA NSTPLTDGA+ +LL  E  A E GL  L Y+R+   +A+
Sbjct:  216 AWKDGLIRGEVMTAFPEPYGQWIDKDNNIREDSTLESYAKLRPAFDRKFGTVTAANSTPLTDGAAAILLMREGRAKELGLKPLGYIRSYAFSAI 309          
The following BLAST results are available for this feature:
BLAST of EY684984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
FADI_ECO8A1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O8 (st... [more]
FADI_ECO811.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O81 (s... [more]
FADI_ECO7I1.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O7:K1 ... [more]
FADI_ECO551.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECO451.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1... [more]
FADI_ECO271.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O127:H... [more]
FADI_ECO241.834e-1446.883-ketoacyl-CoA thiolase OS=Escherichia coli O139:H... [more]
FADI_VIBCH2.395e-1444.683-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI... [more]
FADI_VIBC32.395e-1444.683-ketoacyl-CoA thiolase OS=Vibrio cholerae serotyp... [more]
FADI_PHOPR3.128e-1445.743-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684984 ID=EY684984; Name=EY684984; organism=Citrus sinensis; type=EST; length=883bp
CTTGCAGAACGGGTCCCGGAATTCCGGGTCGACGAATTCACCGCTGCGGT
TTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGGCAGCCC
ATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGGGGCGTG
GAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGGGGACAG
GCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGTCCCGGG
NCAGGCCGCGATACGGGCTGATCGAATCATCGACCAAACCCTGCTTGTAA
GCCGGCGACCACCGCTGGAGACTAACTCAGGGCAAAGAAACCAAACCGCA
CCGAACTACCAACCACCACCCCCCCACACGCCCCAAACCACCCACACACA
CCCGACGGGAGACACACGGCAGAAAACCACCAACAGAGAGGAGGGGGGGG
GGGGGGAGTTCGAAGAAGACGGGTCAGTCCGCAGAACCGCGAAGCACTAA
AGCCAAACGTCTCACGCCGGCCCGCGCCTGCCACGCGACGAGGCACCACC
GACGCGGACCGCCCGCACAACCTGACTTAGAAAAACGAAATCATAAAAGA
CCAATGTATAACGGAAAAGAGGCAAGCGGCACTAGTCCGGCCCCCAGCCC
AGACCGTAAGACACCGTACCACCAAAGCCCCTCGAGCCCCCACCCCTCGG
AGGGGGCGGAAAGACAGACCCGCACCCCACCCCCCGCCCCCTCCGAGAAC
GACAGCCTGTCGGCAAGCCCGGCACCCGCCACCTCCGAACGAGGCCGCGC
TCACAAGGAACCGACAACCACAGGACCGCGCACCCGCCCCGGCGCCCACT
TCCCGAACACCGCCCCCACACGCGACAGGAAAA
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