EY684984

Overview
NameEY684984
Unique NameEY684984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.128e-14
Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = -3
Query:   39 AYKQGLVDDSIS-----PY-RGLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAV 302
            A++ G++ D +      PY + L  DNN+R D+++E+ + L PA+DR++GT+TA NSTPLTDGA+ VL+ SE+ A   GL  L YLR+   +A+
Sbjct:  216 AWESGVLRDEVMTAYVPPYEKALSEDNNVRHDSAIEQYSRLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESKAKSLGLTPLGYLRSYAFSAI 309          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.128e-14
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDSIS-----PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A+ +G + D +      PY+     DNN+R +++L   A L PA+DRQ+GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  209 SHQRAAQAWAEGKLADEVMTTYAPPYKEPFSEDNNIRGNSTLADYAKLRPAFDRQHGTVTAANSTPLTDGAAAVILMTESRAKELGLAPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOSM (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+  L  DNN+R +++L   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPLAEDNNIRGNSTLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ECOLC (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadI PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.336e-14
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = -3
Query:   36 QRWSPA-YKQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 317
            Q WS    K+ ++   I PY+     DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  215 QAWSDGKLKEEVMTAFIPPYKQPFVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadI PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.969e-14
Identity = 43/102 (42.16%), Postives = 66/102 (64.71%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDSIS-----PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A+ +G + + +      PY+  L  DNN+R +++L   A L PA+DR++GT+TA NSTPLTDGA+ V++ +E+ A E GL  L YLR+    A++
Sbjct:  209 SHQRAAQAWSEGKLTNEVMTAYVPPYKAPLSEDNNIRGNSTLADYARLRPAFDRKHGTVTAANSTPLTDGAAAVIMMTESRAKELGLTPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadI PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.969e-14
Identity = 42/102 (41.18%), Postives = 70/102 (68.63%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDSIS-----PY-RGLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A++QGL++D +      P+ +   +DNN+RA++ ++  A L PA+DR++GT+TA NSTPLTDGA+ V+L + + A E G+  L +LR+   +A++
Sbjct:  209 SHQRAAHAWQQGLLNDEVMTACVPPWEQPFEQDNNVRAESKMQDYARLRPAFDRRHGTVTAANSTPLTDGAAAVILMTASRARELGIAPLGFLRSYAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadI PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.969e-14
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A+ +G + D      I P+R  L  DNN+R  ++L   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  209 SHQRAALAWSEGKLGDEVMTVYIPPFREPLSEDNNIRGTSTLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.553e-13
Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = -3
Query:   36 PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 266
            PYR  L  DNN+R  +SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    AV+
Sbjct:  233 PYREPLSEDNNIRKTSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRARELGLTPLGYLRSYAFTAVD 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadI PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = -3
Query:   60 SPAYKQGLVDDSI-----SPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 308
            S A++ G +   +      PY+  +  DNN+R D++LE  A L PA+DRQ G++TA NSTPLTDGA+ VLL  E  A E G+ +L Y+R
Sbjct:  213 SQAWRDGKIAGEVMTAFPEPYKKWIAEDNNIRHDSTLEGYAKLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIR 301          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadI PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = -3
Query:   60 SPAYKQGLVDDSI-----SPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 308
            S A++ G +   +      PY+  +  DNN+R D++LE  A L PA+DRQ G++TA NSTPLTDGA+ VLL  E  A E G+ +L Y+R
Sbjct:  213 SQAWRDGKIAGEVMTAFPEPYKKWIAEDNNIRHDSTLEGYAKLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIR 301          
The following BLAST results are available for this feature:
BLAST of EY684984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
FADI_ERWCT3.128e-1444.683-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
FADI_CITK83.128e-1444.123-ketoacyl-CoA thiolase OS=Citrobacter koseri (str... [more]
FADI_ECOSM4.086e-1445.833-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOLC5.336e-1445.833-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ESCF36.969e-1442.163-ketoacyl-CoA thiolase OS=Escherichia fergusonii ... [more]
FADI_ERWT96.969e-1441.183-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]
FADI_ENT386.969e-1445.103-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
FADI_ENTS81.553e-1353.853-ketoacyl-CoA thiolase OS=Enterobacter sakazakii ... [more]
FADI_VIBVY2.648e-1346.073-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADI_VIBVU2.648e-1346.073-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684984 ID=EY684984; Name=EY684984; organism=Citrus sinensis; type=EST; length=883bp
CTTGCAGAACGGGTCCCGGAATTCCGGGTCGACGAATTCACCGCTGCGGT
TTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGGCAGCCC
ATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGGGGCGTG
GAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGGGGACAG
GCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGTCCCGGG
NCAGGCCGCGATACGGGCTGATCGAATCATCGACCAAACCCTGCTTGTAA
GCCGGCGACCACCGCTGGAGACTAACTCAGGGCAAAGAAACCAAACCGCA
CCGAACTACCAACCACCACCCCCCCACACGCCCCAAACCACCCACACACA
CCCGACGGGAGACACACGGCAGAAAACCACCAACAGAGAGGAGGGGGGGG
GGGGGGAGTTCGAAGAAGACGGGTCAGTCCGCAGAACCGCGAAGCACTAA
AGCCAAACGTCTCACGCCGGCCCGCGCCTGCCACGCGACGAGGCACCACC
GACGCGGACCGCCCGCACAACCTGACTTAGAAAAACGAAATCATAAAAGA
CCAATGTATAACGGAAAAGAGGCAAGCGGCACTAGTCCGGCCCCCAGCCC
AGACCGTAAGACACCGTACCACCAAAGCCCCTCGAGCCCCCACCCCTCGG
AGGGGGCGGAAAGACAGACCCGCACCCCACCCCCCGCCCCCTCCGAGAAC
GACAGCCTGTCGGCAAGCCCGGCACCCGCCACCTCCGAACGAGGCCGCGC
TCACAAGGAACCGACAACCACAGGACCGCGCACCCGCCCCGGCGCCCACT
TCCCGAACACCGCCCCCACACGCGACAGGAAAA
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