EY684984

Overview
NameEY684984
Unique NameEY684984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHESH (3-ketoacyl-CoA thiolase OS=Shewanella sediminis (strain HAW-EB3) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 36/80 (45.00%), Postives = 56/80 (70.00%), Query Frame = -3
Query:   36 ISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 272
            + PY+  + RDNN+R ++++E  A L PA+DR++GT+TA  STPLTDGAS VLL SE+ A   G   + Y+++   +A++
Sbjct:  231 VPPYKSFIDRDNNIRENSTIESYAKLRPAFDRKHGTVTAATSTPLTDGASAVLLMSESRAKALGYDPIGYIKSYAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = -3
Query:   36 VSLQRWSPAY-KQGLVDDSISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 326
            ++ + W+  + +  ++   I PY+  + RDNN+R ++ LE  A L PA+DR++GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++    A++
Sbjct:  212 LATETWNSGHLRNEVMTAHIPPYKQFIDRDNNIRENSVLESYAKLRPAFDRKHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = -3
Query:   36 ISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 272
            + PY+  + RDNN+R ++ LE  A L PA+D+Q+GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++   +A++
Sbjct:  231 VPPYKQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = -3
Query:   36 ISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 272
            + PY+  + RDNN+R ++ LE  A L PA+D+Q+GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++   +A++
Sbjct:  231 VPPYKQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = -3
Query:   36 ISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 272
            + PY+  + RDNN+R ++ LE  A L PA+D+Q+GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++   +A++
Sbjct:  231 VPPYKQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = -3
Query:   36 ISPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 272
            + PY+  + RDNN+R ++ LE  A L PA+D+Q+GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++   +A++
Sbjct:  231 VPPYKQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDSIS-----PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A+ +G + + +      PY+     DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  209 SHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SALPK (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A (strain AKU_12601) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDSIS-----PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A+ +G + + +      PY+     DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  209 SHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDSIS-----PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A+ +G + + +      PY+     DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  209 SHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAID 310          
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SALHS (3-ketoacyl-CoA thiolase OS=Salmonella heidelberg (strain SL476) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3
Query:   36 SLQRWSPAYKQGLVDDSIS-----PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S QR + A+ +G + + +      PY+     DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+    A++
Sbjct:  209 SHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAID 310          
The following BLAST results are available for this feature:
BLAST of EY684984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
FADI_SHESH1.314e-1245.003-ketoacyl-CoA thiolase OS=Shewanella sediminis (s... [more]
FADI_SHEFN1.314e-1238.383-ketoacyl-CoA thiolase OS=Shewanella frigidimarin... [more]
FADI_SHEB91.314e-1245.003-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB81.314e-1245.003-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB51.314e-1245.003-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB21.314e-1245.003-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SALTI1.314e-1241.183-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fad... [more]
FADI_SALPK1.314e-1241.183-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]
FADI_SALPA1.314e-1241.183-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]
FADI_SALHS1.314e-1241.183-ketoacyl-CoA thiolase OS=Salmonella heidelberg (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684984 ID=EY684984; Name=EY684984; organism=Citrus sinensis; type=EST; length=883bp
CTTGCAGAACGGGTCCCGGAATTCCGGGTCGACGAATTCACCGCTGCGGT
TTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGGCAGCCC
ATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGGGGCGTG
GAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGGGGACAG
GCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGTCCCGGG
NCAGGCCGCGATACGGGCTGATCGAATCATCGACCAAACCCTGCTTGTAA
GCCGGCGACCACCGCTGGAGACTAACTCAGGGCAAAGAAACCAAACCGCA
CCGAACTACCAACCACCACCCCCCCACACGCCCCAAACCACCCACACACA
CCCGACGGGAGACACACGGCAGAAAACCACCAACAGAGAGGAGGGGGGGG
GGGGGGAGTTCGAAGAAGACGGGTCAGTCCGCAGAACCGCGAAGCACTAA
AGCCAAACGTCTCACGCCGGCCCGCGCCTGCCACGCGACGAGGCACCACC
GACGCGGACCGCCCGCACAACCTGACTTAGAAAAACGAAATCATAAAAGA
CCAATGTATAACGGAAAAGAGGCAAGCGGCACTAGTCCGGCCCCCAGCCC
AGACCGTAAGACACCGTACCACCAAAGCCCCTCGAGCCCCCACCCCTCGG
AGGGGGCGGAAAGACAGACCCGCACCCCACCCCCCGCCCCCTCCGAGAAC
GACAGCCTGTCGGCAAGCCCGGCACCCGCCACCTCCGAACGAGGCCGCGC
TCACAAGGAACCGACAACCACAGGACCGCGCACCCGCCCCGGCGCCCACT
TCCCGAACACCGCCCCCACACGCGACAGGAAAA
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