EY684938

Overview
NameEY684938
Unique NameEY684938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684938_ssr483 microsatellite EY684938_ssr483:483..494. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.466e-56
Identity = 111/238 (46.64%), Postives = 162/238 (68.07%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  454 LLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 219.935 bits (559), Expect = 1.466e-56
Identity = 111/238 (46.64%), Postives = 162/238 (68.07%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  454 LLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 219.935 bits (559), Expect = 1.466e-56
Identity = 111/238 (46.64%), Postives = 162/238 (68.07%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  454 LLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 219.935 bits (559), Expect = 1.466e-56
Identity = 111/238 (46.64%), Postives = 162/238 (68.07%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  454 LLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.915e-56
Identity = 112/234 (47.86%), Postives = 160/234 (68.38%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            ++T+S  +LTSL  Y++RMK GQ DI+YITG +K+ +E SPFLE+LKKK YEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I++ELR+R   D  D  V+    L ++TALL +GFSL+DP  F SRI+  +K  L+I
Sbjct:  439 HSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSI 671          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.915e-56
Identity = 112/234 (47.86%), Postives = 160/234 (68.38%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            ++T+S  +LTSL  Y++RMK GQ DI+YITG +K+ +E SPFLE+LKKK YEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I++ELR+R   D  D  V+    L ++TALL +GFSL+DP  F SRI+  +K  L+I
Sbjct:  439 HSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSI 671          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.501e-56
Identity = 103/234 (44.02%), Postives = 165/234 (70.51%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE----SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            ++++S   +T+L  Y++RMK GQK I+Y+TG +K++LE SPF+E+ +++ +EV+F T+P+DEY+MQ + D+EDKKF  ++KEG+   +  ++K+ +E    +++ L K  K  L  + V+ V VS RL  +PC++VTS++GWSA+ME+IM++Q L D+S  AYM  K+ +EINP HPI+KEL+ RV  D  D  V+    L + TALL +GF+L+DP  +A RI+  +K  L++
Sbjct:  441 HSSESGEDMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGFEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKTAYERLCKAMKDVLG-DKVEKVVVSERLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMSKKTMEINPAHPIVKELKRRVEADENDKAVKDLVYLLFDTALLTSGFTLDDPTSYAERIHRMIKLGLSL 673          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.266e-56
Identity = 107/234 (45.73%), Postives = 161/234 (68.80%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            Y+++S  ++T+L  Y++RMKAGQK I+YITG +K++LE SPF+E+ K++  EV+F T+P+DEY+MQ + D+EDKKF  ++KEG+   +  ++K+ +E  K    +L K  K  L  + V+ V VS  L  +PC++VTS++GWSA+ME+IM++Q L D+S   YM  K+ +E+NPRHPIIKELR RV  D  D  V+    L + T+LL +GF L DP  +A RI   +K  L++
Sbjct:  437 YSSESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLESSPFIEQAKRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLG-DKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSL 669          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.572e-56
Identity = 110/238 (46.22%), Postives = 161/238 (67.65%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+    F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  454 LLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANPAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.277e-56
Identity = 110/238 (46.22%), Postives = 162/238 (68.07%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   +  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  455 LLRYHTSQSGDEMTSLSEYVSRMKESQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKTLVSVTKEGLELPEDEEEKKNMEESKAKFETLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKADANKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 691          
The following BLAST results are available for this feature:
BLAST of EY684938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HS90B_MACFA1.466e-5646.64Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN1.466e-5646.64Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE1.466e-5646.64Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_BOVIN1.466e-5646.64Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HSP81_ORYSJ1.915e-5647.86Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.915e-5647.86Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP85_TRYCR2.501e-5644.02Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_LEIIN4.266e-5645.73Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HS90B_MOUSE5.572e-5646.22Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_CHICK7.277e-5646.22Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684938 ID=EY684938; Name=EY684938; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGTACTCTCTTATAACACACAGTCAGATGGTAAATTGACT
AGTCTGGACCAGTACATTTCAAGAATGAAAGCTGGACAAAAGGACATCTT
TTACATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCATTCCTGG
AGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGATCCAGTT
GATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAAGTTCCA
AAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAGATAAGG
AACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTT
GCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGATAACAC
CCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATATGGAGA
GGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCATATATG
CGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCATCAAAGA
GCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAA
CAGCCCAGCTCTTTTACCAGACGGCACTCTTGGAGAATGGCTTTTCCCTC
AATGATCCCAAGGATTTTGCCTCCCGAATTTACACAACGGTGAAAACTAA
CCTTAACATAACCCCTTGATGCGACTAGTGAAGACGCAAAAGATGTACAA
ACACACGATGCCGCACGCCTACAATCAAAAAGTCTCTCGGACGCCCGCGG
CGACGGGAGCAAAAATAATTCTCTGAAGGAAACAGAGTGACATGCGCAGA
TAGAGACAAGTGCAACAAAAAACACAA
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