EY684938

Overview
NameEY684938
Unique NameEY684938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684938_ssr483 microsatellite EY684938_ssr483:483..494. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.046e-55
Identity = 112/236 (47.46%), Postives = 158/236 (66.95%), Query Frame = 3
Query:   15 LSYNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            L Y T +  + TSL +Y+SRMK  Q  I+YITG +KE +  S F+ER+K + +EV++  DP+DEY +Q L +Y+ KK  +V+KEGL+L +  ++K    E K +++ L K  K  L  + ++ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H I+K LRERV  D  D  V+    L ++TALL +GFSL +P+  ASRIY  +K  L+I
Sbjct:  438 LRYATSAGEEPTSLKEYVSRMKENQTQIYYITGESKEVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDIL-EKKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGLDI 672          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.372e-54
Identity = 107/237 (45.15%), Postives = 162/237 (68.35%), Query Frame = 3
Query:   15 LSYNTQSDGK-LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            L ++T + G    SL  Y+SRMK  QK +++ITG +K+Q+  S F+ER+K + +EV++ T+P+DEY++Q+L +Y+ K+  +V+KEGL+L +D  +K+ +E     F+ L K  K  L S+ V+ V VSNRL ++PC +VTS++GWSANMERIM++Q L D +   YM GK+ LEINP HPI++ LR++   D  D  V+    L ++T+LL +GFSL+ P+  ASRIY  +K  L I
Sbjct:  448 LRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFEGLCKLMKSILDSK-VEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVEALRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI 683          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.341e-54
Identity = 111/236 (47.03%), Postives = 159/236 (67.37%), Query Frame = 3
Query:   15 LSYNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            L Y+T +  + TSL +Y+SRMK  Q  I+YITG +K+ +  S F+ER+K + +EV++  DP+DEY +Q L +Y+ KK  +V+KEGL+L +  ++K    E K +++ L K  K  L  + V+ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H I+K LR+RV  D  D  V+    L ++TALL +GFSL +P+  ASRIY  +K  L+I
Sbjct:  434 LRYSTSAGDEPTSLKEYVSRMKENQTQIYYITGESKDVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDIL-EKKVEKVGVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSHASRIYRMIKLGLDI 668          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.057e-54
Identity = 106/237 (44.73%), Postives = 162/237 (68.35%), Query Frame = 3
Query:   15 LSYNTQSDGK-LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            L ++T + G    SL  Y+SRMK  QK +++ITG +K+Q+  S F+ER+K + +EV++ T+P+DEY++Q+L +Y+ K+  +V+KEGL+L +D  +K+ +E     F+ L K  K  L ++ V+ V VSNRL ++PC +VTS++GWSANMERIM++Q L D +   YM GK+ LEINP HPI++ LR++   D  D  V+    L ++T+LL +GFSL+ P+  ASRIY  +K  L I
Sbjct:  448 LRFHTSASGDDFCSLADYVSRMKDNQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNK-VEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI 683          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.993e-54
Identity = 105/237 (44.30%), Postives = 160/237 (67.51%), Query Frame = 3
Query:   15 LSYNTQSDGK-LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            L ++T + G    SL  Y+SRMK  QK +++ITG +K+Q+  S F+ER+K + +EV++ T+P+DEY++Q+L +Y+ K+  +V+KEGL+L +D  +K+ +E     F+ L K    A+    V+ V VSNRL ++PC +VTS++GWSANMERIM++Q L D +   YM GK+ LEINP HPI++ LR++   D  D  V+    L ++T+LL +GFSL+ P+  ASRIY  +K  L I
Sbjct:  447 LRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDDAEKKKREEDKAKFESLCKLMN-AILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI 682          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.896e-54
Identity = 105/234 (44.87%), Postives = 158/234 (67.52%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            Y+T+S   +T+L  Y++RMKA Q  I+YITG +K++LE SPF+E+ K++ +EV+F T+P DEY+MQ + D+EDKKF  ++KEG+   +  ++K  +E  K    +L K  K  L  + V+ V VS RL  +PC++VTS++GWSA+ME++M++Q L D+S   YM  K+ +E+NP+HPIIKELR RV  D  D  V+    L + T+LL +GF L DP  +A RI   +K  L++
Sbjct:  438 YSTESGEVMTTLKDYVTRMKAEQNSIYYITGDSKKKLESSPFIEQAKRRGFEVLFMTEPYDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKRQREEEKATCEKLCKTMKEVLG-DKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSSMAQYMMSKKTMELNPKHPIIKELRRRVEADENDKAVKDLVFLLFDTSLLTSGFQLEDP-TYAERINRMIKLGLSL 669          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.517e-53
Identity = 104/232 (44.83%), Postives = 155/232 (66.81%), Query Frame = 3
Query:   27 TQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKE----LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            T+S  +L SL +Y+ RMK+ QK ++YITG +K+ +  SPFLE LK ++YEV++ TDP+DEY +Q + ++E KK +  +KEGL+L +   +K+    LKE  + L K  K  L  + V+ V    R  ++PC +VTS++GWSANMERIM++Q L D+S  +YM  K+++EINPRH I+KEL+ R   D  D  V+    L Y TALL +GF+L++P  F +RIY  +K  L++
Sbjct:  464 TKSGDELVSLKEYVDRMKSDQKFVYYITGESKQSVASSPFLETLKARDYEVLYMTDPIDEYAVQQIKEFEGKKLKCCTKEGLELDEGEDEKKSFEALKEEMEPLCKHIKEVL-HDKVEKVVCGTRFTDSPCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKARAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLSL 694          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.982e-53
Identity = 101/234 (43.16%), Postives = 163/234 (69.66%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE----SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            ++++S  ++T+L  Y++RMK GQK I+Y+TG +K++LE SPF+E+ +++  EV+F TDP+DEY+MQ + D+EDKKF  ++KEG+   +  ++K+ +E    S++ L K  K  L  + V+ V VS+RL  +PC++VTS++GWSA+ME+IM++Q L D+S  AYM  K+ +EIN  H I+KEL+ RV  D  D   +    L + T+LL +GF+L+DP  +A RI+  +K  L++
Sbjct:  441 HSSESGEEMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGMEVLFMTDPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKASYERLCKAMKEVLG-DKVEKVVVSDRLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMRKKTMEINTTHAIVKELKRRVEADENDKAAKDLIFLLFDTSLLTSGFTLDDPTAYADRIHRMIKLGLSL 673          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 208.379 bits (529), Expect = 4.415e-53
Identity = 110/234 (47.01%), Postives = 149/234 (63.68%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            Y + S  ++ SL  Y +RMK  QK I+YITG  K+Q+  S F+ERL+K   EVI+  +P+DEY +Q L ++E K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V VSNRL  +PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP H II+ LR++   D  D  V+    L Y+TALL +GFSL DP+  A+RIY  +K  L I
Sbjct:  467 YTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDIL-EKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGI 699          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.415e-53
Identity = 110/234 (47.01%), Postives = 149/234 (63.68%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            Y + S  ++ SL  Y +RMK  QK I+YITG  K+Q+  S F+ERL+K   EVI+  +P+DEY +Q L ++E K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V VSNRL  +PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP H II+ LR++   D  D  V+    L Y+TALL +GFSL DP+  A+RIY  +K  L I
Sbjct:  467 YTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDIL-EKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGI 699          
The following BLAST results are available for this feature:
BLAST of EY684938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HSP90_CAEBR8.046e-5547.46Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP83_DROPS1.372e-5445.15Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP90_CAEEL2.341e-5447.03Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP83_DROME3.057e-5444.73Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP83_DROAV3.993e-5444.30Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_LEIAM8.896e-5444.87Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP90_THEAN1.517e-5344.83Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP83_TRYBB1.982e-5343.16Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HS90A_PIG4.415e-5347.01Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR4.415e-5347.01Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684938 ID=EY684938; Name=EY684938; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGTACTCTCTTATAACACACAGTCAGATGGTAAATTGACT
AGTCTGGACCAGTACATTTCAAGAATGAAAGCTGGACAAAAGGACATCTT
TTACATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCATTCCTGG
AGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGATCCAGTT
GATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAAGTTCCA
AAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAGATAAGG
AACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTT
GCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGATAACAC
CCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATATGGAGA
GGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCATATATG
CGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCATCAAAGA
GCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAA
CAGCCCAGCTCTTTTACCAGACGGCACTCTTGGAGAATGGCTTTTCCCTC
AATGATCCCAAGGATTTTGCCTCCCGAATTTACACAACGGTGAAAACTAA
CCTTAACATAACCCCTTGATGCGACTAGTGAAGACGCAAAAGATGTACAA
ACACACGATGCCGCACGCCTACAATCAAAAAGTCTCTCGGACGCCCGCGG
CGACGGGAGCAAAAATAATTCTCTGAAGGAAACAGAGTGACATGCGCAGA
TAGAGACAAGTGCAACAAAAAACACAA
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