EY684938

Overview
NameEY684938
Unique NameEY684938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HTPG_METS4 (Chaperone protein htpG OS=Methylobacterium sp. (strain 4-46) GN=htpG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 59/221 (26.70%), Postives = 105/221 (47.51%), Query Frame = 3
Query:   48 TSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----------EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRI 680
            TS   Y+SRMK  Q+ I+ + G +   L +S  +E  + +  EV+  +D VD +  + L  ++ K  +++++          EG   G+     EL    KE+ K        ++V +V+ S RL  +  ++  S  G    M+R+++       + + +  G  VLE+NPRH +++ + ER  +  ED G  + AQ     A ++ G    DP  FA R+
Sbjct:  400 TSFADYVSRMKPNQEAIYILVGDDAAALARSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSITQSADDLSAFAPEGEAAGEAADLTELLPKLKEILK--------DDVAEVRASQRLVESAVLLSASSGGPDLQMQRLLR------RAGRGFGAGLPVLELNPRHALVRRIAER-ARAGEDVG--EAAQTLLDLAHVQGGDPPRDPVAFARRV 603          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 3
Query:   36 DGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDN 398
            +G+L  L      MKA QK I+YITG  K+Q+  S F+E L+K   EVI+  + +D+Y +Q L + E K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V  V VSN +++
Sbjct:  156 EGQLEELKDSRRVMKANQKHIYYITGETKDQVANSAFVECLQKHGLEVIYMIELIDKYCVQQLKELESKTVVSVAKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDML-EKKVKKVVVSNCMED 279          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 66/227 (29.07%), Postives = 106/227 (46.70%), Query Frame = 3
Query:   27 TQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGL------KLGKD---TKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRI 680
            T + G+  SL QY+  MK  Q +I+Y+ G + ++L+ +P LE    +  EV+  TD VD +     +D+  K  +++S+  +      KL  D    K  E K     +    K AL  + V DVK S RL  +   +V   +G    +E++     L+ A+K A    K VLEIN  HP++  L +      + A     + L  + A + +G    DP  FA R+
Sbjct:  401 TTTAGEKRSLAQYVEAMKENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQGEVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDAL-GDRVSDVKASQRLTASASCLVAGGFGPDRELEKM-----LARANKGA--ATKPVLEINLGHPLVAALAD---TKADKADATDLSFLLLEQAQILDGELPEDPAAFAGRL 616          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HTPG_SULDN (Chaperone protein htpG OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12
Identity = 60/229 (26.20%), Postives = 112/229 (48.91%), Query Frame = 3
Query:   12 VLSYNTQSDGKLTSLDQYISRMKAGQKDIFYITG-ANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE----SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAG-VQQTAQLFYQTALLENGFSLNDPKDFASRI 680
            +L +NT +  +   ++++I  +   +K+I+YITG  +   L+ SP LER K +   V+   + +D  +   + +Y++ K  +V+   +K  ++  DK+ +E     F+ LTK  K +L  ++V  V+V+  L ++P  +   K   +  M +IM+    S  +         +L+INP+H +I +L     K+  D   +   A L    A L +G  L D   F  R+
Sbjct:  406 LLKFNTINSDEKIMIEEFIKNVDETKKEIYYITGKTSLSMLKSSPALERFKSRGINVLVLNEEIDTIIFPMVTEYKEYKLIHVN--DVKFEENENDKKAQEKSSKEFEGLTKELKESL-GDSVKSVEVTFDLVDSPVKLKEDKEDPAFMMAQIMKQMGQSGDTPAP----APILQINPKHELIIKL-----KNSADINLINDAAHLLLDQAKLFDGVQLEDTAGFVLRL 622          
The following BLAST results are available for this feature:
BLAST of EY684938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_METS41.813e-1426.70Chaperone protein htpG OS=Methylobacterium sp. (st... [more]
HS905_HUMAN1.813e-1439.20Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]
HTPG_RHOP22.618e-1329.07Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_SULDN2.217e-1226.20Chaperone protein htpG OS=Sulfurimonas denitrifica... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684938 ID=EY684938; Name=EY684938; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGTACTCTCTTATAACACACAGTCAGATGGTAAATTGACT
AGTCTGGACCAGTACATTTCAAGAATGAAAGCTGGACAAAAGGACATCTT
TTACATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCATTCCTGG
AGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGATCCAGTT
GATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAAGTTCCA
AAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAGATAAGG
AACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTT
GCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGATAACAC
CCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATATGGAGA
GGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCATATATG
CGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCATCAAAGA
GCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAA
CAGCCCAGCTCTTTTACCAGACGGCACTCTTGGAGAATGGCTTTTCCCTC
AATGATCCCAAGGATTTTGCCTCCCGAATTTACACAACGGTGAAAACTAA
CCTTAACATAACCCCTTGATGCGACTAGTGAAGACGCAAAAGATGTACAA
ACACACGATGCCGCACGCCTACAATCAAAAAGTCTCTCGGACGCCCGCGG
CGACGGGAGCAAAAATAATTCTCTGAAGGAAACAGAGTGACATGCGCAGA
TAGAGACAAGTGCAACAAAAAACACAA
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