EY684928

Overview
NameEY684928
Unique NameEY684928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_RAT (Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus GN=Got2 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.258e-44
Identity = 99/206 (48.06%), Postives = 130/206 (63.11%), Query Frame = 2
Query:  161 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            P DPILGVT A+ +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL DF K SA+L LG +S  +K  R  TVQ +SGTG+LRVGA FL R +     +++P+P+WGNH  +F  AG+ ++ YRYYDP T G +F  A   I ++    + LL HA A NPTGV         ++  ++ K L  FFD
Sbjct:   40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAG-KNLDKEYLPIGGLADFCKASAELALGENSEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLL-HACAHNPTGVDPRPEQWKEMAAVVKKKNLFAFFD 243          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.803e-44
Identity = 98/206 (47.57%), Postives = 130/206 (63.11%), Query Frame = 2
Query:  161 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            P DPILGVT A+ +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL +F K SA+L LG +S  +K  R  TVQ +SGTG+LR+GA FL R +     +++P+PTWGNH  +F  AG+ ++ YRYYDP T G +F  A   I ++    + LL HA A NPTGV         I+  ++ + L  FFD
Sbjct:   40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLL-HACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFD 243          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_HORSE (Aspartate aminotransferase, mitochondrial OS=Equus caballus GN=GOT2 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.660e-44
Identity = 100/215 (46.51%), Postives = 131/215 (60.93%), Query Frame = 2
Query:  134 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            S +  +   P DPILGVT AY +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL +F K SA+L LG +S A+K  R  TVQ +SGTG+LR+GA FL R +     +++P+P+WGNH  +F  AGL +  YRYYDP T G +   A   I ++    + LL HA A NPTGV         I+  ++   L  FFD
Sbjct:    2 SWWAHVEMGPPDPILGVTEAYKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEALKSGRYVTVQSISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGLQLHAYRYYDPKTCGFDVTGALEDISKIPQQSIILL-HACAHNPTGVDPRPEQWKEIATLVKKNNLFAFFD 214          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.781e-44
Identity = 98/206 (47.57%), Postives = 130/206 (63.11%), Query Frame = 2
Query:  161 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            P DPILGVT A+ +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL +F K SA+L LG ++  +K  R  TVQ +SGTG+LRVGA FL R +     +++P+P+WGNH  +F  AG+ ++ YRYYDP T G +F  A   I ++    + LL HA A NPTGV         I+  ++ K L  FFD
Sbjct:   40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLL-HACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFD 243          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_BOVIN (Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.244e-44
Identity = 97/217 (44.70%), Postives = 134/217 (61.75%), Query Frame = 2
Query:  128 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            + S +  +   P DPILGVT A+ +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL +F K SA+L LG ++  +K  R  TVQ +SGTG+LR+GA FL R +     +++P+PTWGNH  +F  AG+ +++YRYYDP T G +F  A   I ++    + LL HA A NPTGV         ++  ++   L  FFD
Sbjct:   29 ASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIAGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTGAIEDISKIPAQSVILL-HACAHNPTGVDPRPEQWKEMATVVKKNNLFAFFD 243          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.155e-44
Identity = 97/206 (47.09%), Postives = 130/206 (63.11%), Query Frame = 2
Query:  161 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            P DPILGVT A+ +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL +F K SA+L LG +S  +K  R  TVQ +SGTG+LR+GA FL R +     +++P+P+WGNH  +F  AG+ ++ YRYYDP T G +F  A   I ++    + LL HA A NPTGV         I+  ++ + L  FFD
Sbjct:   40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLL-HACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFD 243          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.155e-44
Identity = 97/206 (47.09%), Postives = 130/206 (63.11%), Query Frame = 2
Query:  161 PEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            P DPILGVT A+ +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL +F K SA+L LG +S  +K  R  TVQ +SGTG+LR+GA FL R +     +++P+P+WGNH  +F  AG+ ++ YRYYDP T G +F  A   I ++    + LL HA A NPTGV         I+  ++ + L  FFD
Sbjct:   40 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLL-HACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFD 243          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.065e-43
Identity = 101/214 (47.20%), Postives = 130/214 (60.75%), Query Frame = 2
Query:  134 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            S F  I  AP DPILGV+ A+  DT+ +KLNLGVGAYRT+E +P VLNV++KAE L++ ++   KEYLPI GL  FNK +A+L+ GA  P IK+ RV T+Q LSGTGSLR+ A  + R++    + I  PTWGNH  +F  A +    YRYYDP T GL+F      I         LL H  A NPTG+         I+  I+ K  + FFD
Sbjct:   51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLML-ERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILL-HGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFD 262          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATM_PIG (Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.286e-43
Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 2
Query:  128 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATPGLNFPRACWRIFRLHHPELKLLPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            + S +  +   P DPILGVT A+ +DT+  K+NLGVGAYR D GKP VL  +RKAE  +   ++  KEYLPI GL +F K SA+L LG ++  +K  R  TVQ +SGTG+LR+GA FL R +     +++P+P+WGNH  +F  AG+ + +YRYYDP T G +F  A   I ++    + LL HA A NPTGV         ++  ++   L  FFD
Sbjct:   29 ASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLHSYRYYDPKTCGFDFTGALEDISKIPAQSVILL-HACAHNPTGVDPRPEQWKEMATLVKKNNLFAFFD 243          
BLAST of EY684928 vs. ExPASy Swiss-Prot
Match: AATC_BOVIN (Aspartate aminotransferase, cytoplasmic OS=Bos taurus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.219e-39
Identity = 93/225 (41.33%), Postives = 132/225 (58.67%), Query Frame = 2
Query:  122 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTDEGKPLVLNVLRKAEQLLMNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATPGLNFPRACWRIFRLHHPELKL-LPHAWALNPTGVTHPLSNGNTISHFIRLKGLMTFFD 775
            M   S+F ++ +A    +  +T  + +D  P K+NLGVGAYRTD+ +P VL V+RK EQ + ND S   EYLPI+GL +F   +++L LG DSPA+++ RV  VQCL GTG+LR+GAEFLAR Y+        +Y+  PTW NH  VF  AG   +++Y Y+D A  GL+       + +   PE  + + HA A NPTG          I+  ++ + L  FFD
Sbjct:    1 MAPPSIFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQRIANDSSINHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQCLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFIAAGFKDIRSYHYWDAAKRGLDLQGFLNDLEKA--PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFD 223          
The following BLAST results are available for this feature:
BLAST of EY684928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AATM_RAT1.258e-4448.06Aspartate aminotransferase, mitochondrial OS=Rattu... [more]
AATM_HUMAN2.803e-4447.57Aspartate aminotransferase, mitochondrial OS=Homo ... [more]
AATM_HORSE3.660e-4446.51Aspartate aminotransferase, mitochondrial OS=Equus... [more]
AATM_MOUSE4.781e-4447.57Aspartate aminotransferase, mitochondrial OS=Mus m... [more]
AATM_BOVIN6.244e-4444.70Aspartate aminotransferase, mitochondrial OS=Bos t... [more]
AATM_PONAB8.155e-4447.09Aspartate aminotransferase, mitochondrial OS=Pongo... [more]
AATM_MACFA8.155e-4447.09Aspartate aminotransferase, mitochondrial OS=Macac... [more]
AAT5_ARATH1.065e-4347.20Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_PIG5.286e-4344.24Aspartate aminotransferase, mitochondrial OS=Sus s... [more]
AATC_BOVIN1.219e-3941.33Aspartate aminotransferase, cytoplasmic OS=Bos tau... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684928 ID=EY684928; Name=EY684928; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGCCCACGCGTCCGCCGACGCCAATACTATATTAAACCCAA
ACATAATTTTCTCTTCACATTTTTTTCCCCCACAAACTCTCTCATTTCAT
TGATTTCTTGAAAGAAATTTAATGGATTCTGAATCAGTGTTTGGAAAGAT
TGTTCGTGCTCCTGAAGATCCCATTCTAGGGGTCACTGTTGCTTATAACA
AGGATACAAGCCCAGTCAAGTTGAACTTGGGTGTTGGAGCTTACCGAACT
GATGAAGGGAAACCTCTGGTGCTGAATGTATTGAGAAAGGCAGAGCAGCT
CTTAATGAATGACCAGTCACGGGTCAAAGAGTATCTTCCCATTGTTGGAC
TTGTGGATTTTAATAAATTGAGTGCAAAGCTCATCCTTGGTGCTGACAGC
CCTGCGATTAAAGACAACAGAGTGACCACCGTTCAGTGCTTGTCTGGCAC
TGGTTCTTTGAGGGTTGGAGCTGAGTTTCTGGCAAGGCATTATCACCAAC
TTACCATATATATTCCACAGCCAACATGGGGAAACCATCCCAAAGTTTTC
ACTTTAGCAGGATTGTCTGTGAAGACCTACCGCTATTATGATCCAGCAAC
ACCTGGGCTAAACTTCCCAAGGGCTTGCTGGAGGATCTTTAGGCTGCACC
ATCCGGAGCTAAAGCTCCTTCCTCATGCTTGGGCTCTTAATCCAACGGGT
GTAACCCACCCCTTGAGCAATGGGAACACAATCAGCCACTTTATAAGGCT
AAAAGGTTTGATGACTTTCTTTGACCACGGCTTAACAAGGAATTGCAGAA
CGGAACCCAGGAAGGAAAACAGCAGACACACAGCGACCAAAACTGCCAAC
ATAGAGCCCAAAAG
back to top