EY710288

Overview
NameEY710288
Unique NameEY710288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1355
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.904e-32
Identity = 71/137 (51.82%), Postives = 98/137 (71.53%), Query Frame = 2
Query:  209 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHA-GRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD  +K+ + L  E+Q+++  PD   + L DD +F+V+AC+GI + +SSQ++VDFI  ++
Sbjct:  324 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKI 460          

HSP 2 Score: 23.0978 bits (48), Expect = 2.904e-32
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  634 SGCVQKLLEKCLAPSQLG 687
            S  V++LL++CLAP   G
Sbjct:  473 SSIVEELLDQCLAPDTSG 490          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 3.782e-32
Identity = 70/137 (51.09%), Postives = 98/137 (71.53%), Query Frame = 2
Query:  209 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHA-GRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD  +K+ + L  E+Q+++  PD   + L DD +F+V+AC+GI + +SSQ+++DFI  ++
Sbjct:  322 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKI 458          

HSP 2 Score: 23.0978 bits (48), Expect = 3.782e-32
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  634 SGCVQKLLEKCLAPSQLG 687
            S  V++LL++CLAP   G
Sbjct:  471 SSIVEELLDQCLAPDTSG 488          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.116e-32
Identity = 70/153 (45.75%), Postives = 103/153 (67.32%), Query Frame = 2
Query:  209 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHA-GRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVCKNYSKN 664
            G  SG TA V +++   L VANAGDSRCVISR GQA  +S DHKP+ + E  RI+KAGG +   GRVNG LNL+RA+GD  +K    L AE+Q+++  PD   + +  +D+F+VLAC+GI + +SS+++V+F+  +L   K++  +C+    N
Sbjct:  389 GKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDN 541          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 6.414e-32
Identity = 70/137 (51.09%), Postives = 98/137 (71.53%), Query Frame = 2
Query:  209 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHA-GRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD  +K+ + L  ++Q+++  PD   + L DD +F+V+AC+GI + +SSQ++VDFI  ++
Sbjct:  321 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKI 457          

HSP 2 Score: 23.0978 bits (48), Expect = 6.414e-32
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  634 SGCVQKLLEKCLAPSQLG 687
            S  V++LL++CLAP   G
Sbjct:  470 SSIVEELLDQCLAPDTSG 487          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 5.724e-30
Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 2
Query:  200 DFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLH-SEKQILAVCK 649
            D+  P+  GSTACV IIR N +IV N GDSRCV+S+ GQA +LS DHKP  EAE+ RI +AGG +   R+ G L  +RAIGD  +KQ + +   +Q+VTC PD     + DD +F+V+A +G+ D + +  +V F+  +L   E+ +   C+
Sbjct:  134 DYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFLQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCE 285          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.410e-28
Identity = 61/139 (43.88%), Postives = 96/139 (69.06%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQI 634
            +G TA VA+I    L VANAGDSR  ++R G+ +++S+DHKPD E EK RI +AGGF+  GRVNG+L+L+RA+GD+E+K+      E+QI+T  PD    +L   D F+++ C+G+ +    QQ+++FI+ +L + + +
Sbjct:  124 AGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFVSDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFETWDHQQILNFINSELKNTQNL 262          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.410e-28
Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVCK 649
            SG+TA V +I+   +   NAGDSR V S  G+A  LS DHKP  E E  RI+ AGG++   RVNG+L L+RA+GD  FK      AE+QIVT  PD  + +L  D +F+VLAC+GI D +++Q++VDF+ ++L  ++   ++C+
Sbjct:  115 SGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICE 258          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PP2C4_PARTE (Probable protein phosphatase 2C 4 OS=Paramecium tetraurelia GN=GSPATT00020181001 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.841e-28
Identity = 63/137 (45.99%), Postives = 92/137 (67.15%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEK 628
            +G TA VA+   N L VANAGDSR V+ R    Y++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K+   L + +Q++   PD   VEL   D F+++ C+G+ + L  Q L+ FI+ +L +++
Sbjct:  124 AGCTANVALFHKNVLYVANAGDSRSVLCRNNTNYDMSVDHKPDNYEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDSKLRSNEQLIIALPDIKKVELNQTDKFLLMGCDGVFETLDHQDLLKFINQKLGNQQ 260          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.841e-28
Identity = 72/143 (50.35%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  218 SGSTACVAIIRN--NHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPD--NNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQI 634
            SG TA   ++    N L+  NAGDSR V++  G A  LS DHKP L +EK RI+ A GF+   RVNG+L L+RAIGD EFK    L  E+QIVTC PD   +S++  D D+FV+LAC+GI DCL+SQ  VD +H  L   K +
Sbjct:  118 SGCTATSILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDY-DRDEFVILACDGIWDCLTSQDCVDLVHLGLREGKTL 259          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.892e-28
Identity = 67/172 (38.95%), Postives = 103/172 (59.88%), Query Frame = 2
Query:  191 PHSDFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHA-------GR-----------VNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVCK 649
            P + +  P+  GSTACV +IR + LIV +AGDSRCV+SR GQA  LS DHKPD E+E+ R+  AGG           GR             G ++++R+IGD   K+ + L  E Q++TC+PD  ++++ DD +F+V+A EG+   +++Q +VD  HD+L    +   +C+
Sbjct:  182 PQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICE 353          

HSP 2 Score: 24.6386 bits (52), Expect = 3.892e-28
Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = 1
Query:   13 VQKAFFRMDEMMKGQRGWRELAV 81
            ++ AF+ MDE ++    WREL +
Sbjct:  138 MRSAFYSMDEDLQLSDAWRELVI 160          
The following BLAST results are available for this feature:
BLAST of EY710288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PPM1G_HUMAN2.904e-3251.82Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN3.782e-3251.09Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
Y0417_DROME6.116e-3245.75Probable protein phosphatase CG10417 OS=Drosophila... [more]
PPM1G_MOUSE6.414e-3251.09Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
P2C21_ORYSJ5.724e-3044.08Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PP2C6_PARTE1.410e-2843.88Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
PP2C2_CAEEL1.410e-2845.14Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
PP2C4_PARTE1.841e-2845.99Probable protein phosphatase 2C 4 OS=Paramecium te... [more]
PP2C2_YEAST1.841e-2850.35Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
P2C20_ORYSJ3.892e-2838.95Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710288 ID=EY710288; Name=EY710288; organism=Citrus sinensis; type=EST; length=1355bp
CCACGCGTCCGCGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAA
GGGACAAAGAGGATGGAGAGAATTAGCTGTTTNTGGGAGATAAAATAAAT
AAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGA
TAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTG
ATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGA
AACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATC
TAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACAAACCAGATCTTG
AAGCTGAGAAAGANAGGATATTGAAAGCTGGTGGATTTATACATGCAGGA
CGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATT
CAAGCAGAAACAATTTTTGTCTGCTGAAAAGCAAATTGTTACATGCCATC
CAGATAATAACTCTGTTGAGCTGTGTGATGATGATGATTTCGTTGTGCTG
GCGTGTGAAGGAATCTAGGATTGCTTGTCAAGCCAGCAATTAGTAGATTT
TATTCATGACCAACTACATTCGGAAAAGCAAATTCTGGCTGTGTGCAAAA
ATTACTCGAAAAATGTTTGGCCCCATCACAGCTTGGAGTTGAGGATGTGA
CAACTGAGCCTGATCTTAATGAGTTCAAAAACCATCCAGTCCCTTCCTCC
CTTCAAGCCAATGCCTTGGGATTCAATCAAAGACCCAGTCCCCACCAGAA
AAGGAATCAAATCCCGTGAATGACCCTATGCAGGTCCAATTCGGTTCTTT
CCACAAAAAACGAAACCTTTTTATAAATGGGAAAAGAGTGGTTTTGAAGG
CCCCCTGAAAAAAAAAAAAAAATGTTAAATCTTGTCTGTTGTGCTTCATT
CAGACCATAAATTCCTAACAATTAAGAGACACCACTCCCTTGTTTTAGGG
TATATTTTAGCAAAAAAAAGGGCCCAACACTAAAGTGGCAATTTTTCTAT
CGTATATGCGCATTTGGGGGAACGGACCATAATTCTCACTCGATGAAAAC
ATCCACCATAGAAGAGCGATAGGTGGAGTGAAGTTACCAACAACAAATAA
ACATGAATACCCACAAAAAAACACGTAATAAACTAAAGATATGATGTATT
GAGGAATGTCAGACAAGCATCTACAAAACATAACGAAAGATTGAAACAAA
TTGATCAAATTATATGTCTTGAAGATGTGTTCTGTAATAAAACAAAATAA
TACATCGTCATGTGGATAAAATCTTGACATGATGAAGTGGAGGACATTAG
TAAAT
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