EY710288

Overview
NameEY710288
Unique NameEY710288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1355
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.673e-13
Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGG---FIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCD--DDDFVVLACEGI*DCLSSQ 586
            GSTA V++I  + ++VAN GDSR V+ R G+   LS DHKPD   E  RI  AGG   +    RV G L ++RAIGD         +  K  V+C P+   V + D  DDD ++LA +G+ D +S++
Sbjct:  190 GSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIEGAGGRVIYWDCPRVLGVLAMSRAIGD---------NYLKPYVSCEPE---VTITDRRDDDCLILASDGLWDVVSNE 304          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 2.185e-13
Identity = 49/136 (36.03%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI---HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            SG+T   A+I    L VA  GDS+ ++ ++GQ   L   H+P+ + EK RI   GGF+      RVNG+L ++RAIGD+   QK ++S E        D  S  L   +D+++LAC+G  D +  Q++V  +   L
Sbjct:  253 SGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDV--FQKPYVSGE-------ADAASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHL 379          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.085e-12
Identity = 55/134 (41.04%), Postives = 71/134 (52.99%), Query Frame = 2
Query:  221 GSTACVAI-IRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFI 604
            GSTA   I I    L+VAN GDSR V+S+ G A+ LS DH+P    EK  I   GGF+        RV+G L +ARA GD     K  LS+E       PD     + D  +F++ A +GI   LS+Q+ VD I
Sbjct:  127 GSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEP--SKEKKEIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSL--KLHLSSE-------PDITHQTIDDHTEFILFASDGIWKVLSNQEAVDAI 249          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.085e-12
Identity = 47/135 (34.81%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAG----GFIHAGRVN-GSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHD 610
            G TA  A+I  N L VANAGD R +++R G+ + ++RDH      E+ RI+K G      I   RV   +L + R+IGD +          K  VT  P+     L  DD+F+V+A +G+ D +S++ ++  I D
Sbjct:  490 GCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDL---------KPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKD 615          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.417e-12
Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 2
Query:   86 GDKINKFTGM-----IEGLIWSPRGGDSNDQPNDWAFEEG---PHSDFA--GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIH----AGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFI 604
            G K  +F  M     IE  + S R G+        A  EG      DF   G   G+    A+I    L V+NAGD R V+SR G A  L+ DH P    E  RI   GG++       R+ G+L ++R IGD            K+ V   P+  ++ +  + +F++LA +G+ D +++Q+ VD +
Sbjct:  170 GSKAAEFAAMNLGNNIEAAMASARSGEDGCSMES-AIREGYIKTDEDFLKEGSRGGACCVTALISKGELAVSNAGDCRAVMSRGGTAEALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYL---------KEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVV 346          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.850e-12
Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGG---FIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQ 586
            GSTA V+++    +IV+N GDSR V+ R G A  LS DHKPD   E  RI +AGG   +    RV G L ++RAIGD         +  K  V   P+    +  D+D+ ++LA +G+ D + ++
Sbjct:  221 GSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIGD---------NYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNE 336          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C67_ORYSJ (Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.156e-12
Identity = 45/148 (30.41%), Postives = 75/148 (50.68%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYN---------------LSRDHKPDLEAEKXRILKAGGFIHA-GRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            G+TA    +    ++VANAGD++ V++R   A                 L+R+HK     E+ RI KAGG +   GR+ G + ++RA+GD +FK+   ++         PD +S E+   D F++L C+G+         V+F+ +QL
Sbjct:  192 GATAVCVWVLGQTVVVANAGDAKAVLARSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGGSVGPNGRLQGRIEVSRALGDRQFKKVGLIAT--------PDVHSFEVTRKDHFIILGCDGLWGVFGPGDAVEFVQNQL 331          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1K_PONAB (Protein phosphatase 1K, mitochondrial OS=Pongo abelii GN=PPM1K PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.121e-12
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 2
Query:  215 TSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-----HAGRVNGSLNLARAIGDMEFK 454
            TSG+TA VA++R+   L+VA+ GDSR ++ RKG+   L+ DH P+ + EK RI K GGF+         VNG L + R+IGD++ K
Sbjct:  185 TSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLK 270          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.121e-12
Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAG---RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQ 613
            GSTA  AI+  N L VAN GDSR V  + G+A  LS DHKP+ + E+ RI  AGG + +    RV+G L ++RA G+     K+++ AE       P+     + +  +++VLA +G+ D + ++  V  +  Q
Sbjct:  215 GSTAVAAILIGNRLYVANVGDSRAVALKAGKAVPLSEDHKPNKKDERKRIEDAGGIVVSDDIWRVDGILAVSRAFGNR--LMKRYVKAE-------PNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLKAQ 339          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.121e-12
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  194 HSDFAGPTSGSTACVAIIRNNH-LIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDF---IHDQLHSEKQI 634
            HS   G   GSTA  AI+ N   L VAN GDSR V+S+ GQA  ++ DH+P    E+  I   GGF+        RVNG L ++RA GD   K           +   PD     + D  D +VLA +G+   +++Q+ +D    I D L + K++
Sbjct:  118 HSSDLG-RGGSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEP--HTERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKTH---------LRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQEAIDIARRIKDPLKAAKEL 261          
The following BLAST results are available for this feature:
BLAST of EY710288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
P2C24_ARATH1.673e-1340.94Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
PPM1F_HUMAN2.185e-1336.03Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]
P2C58_ARATH1.085e-1241.04Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C04_ORYSJ1.085e-1234.81Protein kinase and PP2C-like domain-containing pro... [more]
P2C30_ARATH1.417e-1230.48Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C37_ARATH1.850e-1237.60Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C67_ORYSJ3.156e-1230.41Probable protein phosphatase 2C 67 OS=Oryza sativa... [more]
PPM1K_PONAB4.121e-1245.35Protein phosphatase 1K, mitochondrial OS=Pongo abe... [more]
P2C55_ORYSJ4.121e-1235.82Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C10_ARATH4.121e-1235.26Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710288 ID=EY710288; Name=EY710288; organism=Citrus sinensis; type=EST; length=1355bp
CCACGCGTCCGCGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAA
GGGACAAAGAGGATGGAGAGAATTAGCTGTTTNTGGGAGATAAAATAAAT
AAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGA
TAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTG
ATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGA
AACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATC
TAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACAAACCAGATCTTG
AAGCTGAGAAAGANAGGATATTGAAAGCTGGTGGATTTATACATGCAGGA
CGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATT
CAAGCAGAAACAATTTTTGTCTGCTGAAAAGCAAATTGTTACATGCCATC
CAGATAATAACTCTGTTGAGCTGTGTGATGATGATGATTTCGTTGTGCTG
GCGTGTGAAGGAATCTAGGATTGCTTGTCAAGCCAGCAATTAGTAGATTT
TATTCATGACCAACTACATTCGGAAAAGCAAATTCTGGCTGTGTGCAAAA
ATTACTCGAAAAATGTTTGGCCCCATCACAGCTTGGAGTTGAGGATGTGA
CAACTGAGCCTGATCTTAATGAGTTCAAAAACCATCCAGTCCCTTCCTCC
CTTCAAGCCAATGCCTTGGGATTCAATCAAAGACCCAGTCCCCACCAGAA
AAGGAATCAAATCCCGTGAATGACCCTATGCAGGTCCAATTCGGTTCTTT
CCACAAAAAACGAAACCTTTTTATAAATGGGAAAAGAGTGGTTTTGAAGG
CCCCCTGAAAAAAAAAAAAAAATGTTAAATCTTGTCTGTTGTGCTTCATT
CAGACCATAAATTCCTAACAATTAAGAGACACCACTCCCTTGTTTTAGGG
TATATTTTAGCAAAAAAAAGGGCCCAACACTAAAGTGGCAATTTTTCTAT
CGTATATGCGCATTTGGGGGAACGGACCATAATTCTCACTCGATGAAAAC
ATCCACCATAGAAGAGCGATAGGTGGAGTGAAGTTACCAACAACAAATAA
ACATGAATACCCACAAAAAAACACGTAATAAACTAAAGATATGATGTATT
GAGGAATGTCAGACAAGCATCTACAAAACATAACGAAAGATTGAAACAAA
TTGATCAAATTATATGTCTTGAAGATGTGTTCTGTAATAAAACAAAATAA
TACATCGTCATGTGGATAAAATCTTGACATGATGAAGTGGAGGACATTAG
TAAAT
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