EY710288

Overview
NameEY710288
Unique NameEY710288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1355
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: SPNA_DICDI (Protein spalten OS=Dictyostelium discoideum GN=spnA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.566e-11
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYN-----------LSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFI 604
            SGST   A++  N L  AN GDS  V++R     N           LS  H    + EK R+   GG I   R+ GSL ++R+ GD E+K+      EK+     P   + +L   D F +LAC+G+ D +   + V F+
Sbjct:  801 SGSTGVSALLVGNKLYTANVGDSEIVLARAQPNANPKGPVTYEPVLLSYKHLASDDQEKKRVTDLGGMIIFNRLFGSLAVSRSFGDKEYKE-----GEKKFCVSDPYQTTTDLTARDHFFILACDGLWDKVEYDEAVQFV 935          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C08_ARATH (Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.045e-11
Identity = 49/167 (29.34%), Postives = 79/167 (47.31%), Query Frame = 2
Query:  209 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKG---------------QAYNLSRDHKPDLEAEKXRILKAGGFIHA-GRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVCKNYSK 661
            G   G+TA    I +  + VAN GD++ V++R                 +A  L+R+HK     E+ RI K+GG I + GR+ G L ++RA GD  FK        K  V+  PD ++ EL + ++F++L C+G+ +       V F+   L     +  V +   K
Sbjct:  171 GWQDGATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAIYPQERSRIQKSGGVISSNGRLQGRLEVSRAFGDRHFK--------KFGVSATPDIHAFELTERENFMILGCDGLWEVFGPSDAVGFVQKLLKEGLHVSTVSRRLVK 329          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.951e-11
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGG----FIHAGRV-NGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHD 610
            G TA  +++  N L VAN GDSR ++ R G  + LS+ H      E+ R++  GG     +   RV    L + R+IGD +          K  VT  P+ +   L  DD+F+V+A +G+ D ++ ++++  I D
Sbjct:  491 GCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDL---------KPAVTAEPEISETILSADDEFLVMASDGLWDVMNDEEVIGIIRD 616          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C12_ORYSJ (Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.951e-11
Identity = 48/147 (32.65%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKG-----QAYNLSRDHKPDLEAEKXRILKAGGFIHA-------------GRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFI 604
            SG+TA  AI +   LI+AN GDSR V++        QA  L+ DHKP +  E  RI ++GG +               G  +  L +AR++GDM  K+   + A        P+  S  +   D F+VLA +G+ D LS++++V  +
Sbjct:  178 SGTTAVCAIKQGRDLIIANLGDSRAVLATMSDTGYLQAVQLTVDHKPSVPEEAARIKRSGGRVFGLKDEPGVMRVWLPGENSPGLAMARSLGDMRLKRHGVIPA--------PEVTSRRVTGADLFMVLATDGVWDVLSNEEVVSIV 316          
The following BLAST results are available for this feature:
BLAST of EY710288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
SPNA_DICDI1.566e-1132.86Protein spalten OS=Dictyostelium discoideum GN=spn... [more]
P2C08_ARATH2.045e-1129.34Probable protein phosphatase 2C 8 OS=Arabidopsis t... [more]
P2C31_ARATH5.951e-1131.11Protein kinase and PP2C-like domain-containing pro... [more]
P2C12_ORYSJ5.951e-1132.65Probable protein phosphatase 2C 12 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710288 ID=EY710288; Name=EY710288; organism=Citrus sinensis; type=EST; length=1355bp
CCACGCGTCCGCGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAA
GGGACAAAGAGGATGGAGAGAATTAGCTGTTTNTGGGAGATAAAATAAAT
AAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGA
TAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTG
ATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGA
AACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATC
TAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACAAACCAGATCTTG
AAGCTGAGAAAGANAGGATATTGAAAGCTGGTGGATTTATACATGCAGGA
CGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATT
CAAGCAGAAACAATTTTTGTCTGCTGAAAAGCAAATTGTTACATGCCATC
CAGATAATAACTCTGTTGAGCTGTGTGATGATGATGATTTCGTTGTGCTG
GCGTGTGAAGGAATCTAGGATTGCTTGTCAAGCCAGCAATTAGTAGATTT
TATTCATGACCAACTACATTCGGAAAAGCAAATTCTGGCTGTGTGCAAAA
ATTACTCGAAAAATGTTTGGCCCCATCACAGCTTGGAGTTGAGGATGTGA
CAACTGAGCCTGATCTTAATGAGTTCAAAAACCATCCAGTCCCTTCCTCC
CTTCAAGCCAATGCCTTGGGATTCAATCAAAGACCCAGTCCCCACCAGAA
AAGGAATCAAATCCCGTGAATGACCCTATGCAGGTCCAATTCGGTTCTTT
CCACAAAAAACGAAACCTTTTTATAAATGGGAAAAGAGTGGTTTTGAAGG
CCCCCTGAAAAAAAAAAAAAAATGTTAAATCTTGTCTGTTGTGCTTCATT
CAGACCATAAATTCCTAACAATTAAGAGACACCACTCCCTTGTTTTAGGG
TATATTTTAGCAAAAAAAAGGGCCCAACACTAAAGTGGCAATTTTTCTAT
CGTATATGCGCATTTGGGGGAACGGACCATAATTCTCACTCGATGAAAAC
ATCCACCATAGAAGAGCGATAGGTGGAGTGAAGTTACCAACAACAAATAA
ACATGAATACCCACAAAAAAACACGTAATAAACTAAAGATATGATGTATT
GAGGAATGTCAGACAAGCATCTACAAAACATAACGAAAGATTGAAACAAA
TTGATCAAATTATATGTCTTGAAGATGTGTTCTGTAATAAAACAAAATAA
TACATCGTCATGTGGATAAAATCTTGACATGATGAAGTGGAGGACATTAG
TAAAT
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