EY710288

Overview
NameEY710288
Unique NameEY710288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1355
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.190e-23
Identity = 57/143 (39.86%), Postives = 86/143 (60.14%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVC 646
            SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EK RI  AGG +   RVNGSL ++RA+GD ++K        +Q+V+  P+   +   ++D+FVVLAC+GI D +S+++L +F++ +L     +  VC
Sbjct:  130 SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVC 272          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.778e-23
Identity = 56/143 (39.16%), Postives = 85/143 (59.44%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVC 646
            SGSTA   ++   H+   N GDSR V+ R GQ    ++DHKP    EK RI  AGG +   RVNGSL ++RA+GD ++K        +Q+V+  P+   +   ++D+FVVLAC+GI D +S+++L +F+  +L     +  VC
Sbjct:  130 SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDDLENVC 272          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.156e-22
Identity = 51/134 (38.06%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  215 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            +SG+TA  A+I +  +++ANAGDSR V+ ++G+A  LS+DHKP+  +E+ RI K GG I+ G +NG L++ARA+GD   K  +        ++C P+   + L ++D+++++ C+G+ D +SSQ  V  +  +L
Sbjct:  164 SSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTK---GSLCPLSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMVRREL 294          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.156e-22
Identity = 61/151 (40.40%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  170 DWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGD--MEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            D AF E    D     SG+TA  AI+    L+VANAGD R V+SR+G+A  +SRDHKP    E+ RI  +GG +  G +NG LN+ARA+GD  ME  +K+   ++   +   P+  + +L ++D+F+++ C+G+ D   SQ  VDF   +L
Sbjct:  174 DTAFLEACSLD-GSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRL 323          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.510e-22
Identity = 58/150 (38.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQF------LSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVCK 649
            SG+TA  A++    L+VANAGD R V+  +G+A  +SRDHKP    EK RI  +GG+++ G +NG LN+ARAIGD   +  +       LSAE +++  +       L ++D+F+++ C+GI D   SQ  VDF   +L      +  CK
Sbjct:  167 SGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKACDGLGPLSAEPEVMIRN-------LTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPVTCCK 309          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.972e-22
Identity = 55/143 (38.46%), Postives = 85/143 (59.44%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVC 646
            SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EK RI  AGG +   RVNGSL ++RA+GD ++K        +Q+V+  P+   +   ++D+F++LAC+GI D +S+++L +F+  +L     +  VC
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVC 272          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.576e-22
Identity = 55/144 (38.19%), Postives = 85/144 (59.03%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDD-FVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVC 646
            SGSTA   +I   H    N GDSR ++ R  + Y  ++DHKP    EK RI  AGG +   RVNGSL ++RA+GD ++K        +Q+V+  P+ + +E  ++DD F++LAC+GI D + +++L DF+  +L     +  VC
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVC 268          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.393e-22
Identity = 54/143 (37.76%), Postives = 85/143 (59.44%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVC 646
            SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EK RI  AGG +   RVNGSL ++RA+GD ++K        +Q+V+  P+   +   ++D+F++LAC+GI D +S+++L +++  +L     +  VC
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVC 272          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.787e-22
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDD-FVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVC 646
            SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EK RI  AGG +   RVNGSL ++RA+GD ++K        +Q+V+  P+ + +E  ++DD F++LAC+GI D + +++L DF+  +L     +  VC
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVC 268          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.787e-22
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDD-FVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAVC 646
            SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EK RI  AGG +   RVNGSL ++RA+GD ++K        +Q+V+  P+ + +E  ++DD F++LAC+GI D + +++L DF+  +L     +  VC
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVC 268          
The following BLAST results are available for this feature:
BLAST of EY710288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PPM1B_RAT5.190e-2339.86Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PPM1B_MOUSE6.778e-2339.16Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
P2C47_ARATH1.156e-2238.06Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C22_ARATH1.156e-2240.40Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C57_ORYSJ1.510e-2238.67Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
PPM1B_BOVIN1.972e-2238.46Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPM1A_BOVIN2.576e-2238.19Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
PPM1B_HUMAN4.393e-2237.76Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
PPM1A_RAT9.787e-2237.50Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT9.787e-2237.50Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710288 ID=EY710288; Name=EY710288; organism=Citrus sinensis; type=EST; length=1355bp
CCACGCGTCCGCGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAA
GGGACAAAGAGGATGGAGAGAATTAGCTGTTTNTGGGAGATAAAATAAAT
AAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGA
TAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTG
ATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGA
AACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATC
TAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACAAACCAGATCTTG
AAGCTGAGAAAGANAGGATATTGAAAGCTGGTGGATTTATACATGCAGGA
CGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATT
CAAGCAGAAACAATTTTTGTCTGCTGAAAAGCAAATTGTTACATGCCATC
CAGATAATAACTCTGTTGAGCTGTGTGATGATGATGATTTCGTTGTGCTG
GCGTGTGAAGGAATCTAGGATTGCTTGTCAAGCCAGCAATTAGTAGATTT
TATTCATGACCAACTACATTCGGAAAAGCAAATTCTGGCTGTGTGCAAAA
ATTACTCGAAAAATGTTTGGCCCCATCACAGCTTGGAGTTGAGGATGTGA
CAACTGAGCCTGATCTTAATGAGTTCAAAAACCATCCAGTCCCTTCCTCC
CTTCAAGCCAATGCCTTGGGATTCAATCAAAGACCCAGTCCCCACCAGAA
AAGGAATCAAATCCCGTGAATGACCCTATGCAGGTCCAATTCGGTTCTTT
CCACAAAAAACGAAACCTTTTTATAAATGGGAAAAGAGTGGTTTTGAAGG
CCCCCTGAAAAAAAAAAAAAAATGTTAAATCTTGTCTGTTGTGCTTCATT
CAGACCATAAATTCCTAACAATTAAGAGACACCACTCCCTTGTTTTAGGG
TATATTTTAGCAAAAAAAAGGGCCCAACACTAAAGTGGCAATTTTTCTAT
CGTATATGCGCATTTGGGGGAACGGACCATAATTCTCACTCGATGAAAAC
ATCCACCATAGAAGAGCGATAGGTGGAGTGAAGTTACCAACAACAAATAA
ACATGAATACCCACAAAAAAACACGTAATAAACTAAAGATATGATGTATT
GAGGAATGTCAGACAAGCATCTACAAAACATAACGAAAGATTGAAACAAA
TTGATCAAATTATATGTCTTGAAGATGTGTTCTGTAATAAAACAAAATAA
TACATCGTCATGTGGATAAAATCTTGACATGATGAAGTGGAGGACATTAG
TAAAT
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