EY710288

Overview
NameEY710288
Unique NameEY710288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1355
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.238e-16
Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 2
Query:  215 TSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVEL-CDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQILAV 643
            T G+TA VA++R+   L+VA+ GDSR ++ R+G+ + L+ DH P+ + EK RI K+GGF+         VNG L + R+IGD++ K           V   P+   V+L   DD F+VL  +GI   ++SQ++ D I +Q H  K+   V
Sbjct:  186 TCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMG--------VIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDII-NQCHDPKEAAQV 326          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.238e-16
Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  215 TSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCD-DDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEKQ 631
            TSG+TA VA++R+   L++A+ GDSR ++ RKG+   L+ DH P+ + EK RI K GGF+         VNG L + R++GD++ K           V   P+   ++L   DD F+VL  +GI   ++SQ++ DF+ +Q H   +
Sbjct:  185 TSGTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSG--------VIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV-NQCHDPNE 321          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.617e-16
Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  215 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI---HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQ 586
            T GSTA VA++    ++VAN GDSR V+SR G A  LS DHKPD   E  R+  AGG +   +  RV G L  +R+IGD  +  K F+SAE       P+   VE  D D+F++LA +G+ D +S++
Sbjct:  202 TVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGD--YYLKPFVSAE-------PEVRVVERTDKDEFLILASDGLWDVVSNE 319          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.617e-16
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDD-DFVVLACEGI*DCLSSQQLVDF---IHDQLHSEKQIL 637
            +GSTA  AI+  + L+VAN GDSR V+ R G A  +SRDHKPD   E+ RI  AGGF+  AG  RV G L ++RA GD     KQ++ A+ +I          E+ D   +F++LA +G+ D +S+++ VD    I D   + K++L
Sbjct:  173 AGSTASTAILVGDRLLVANVGDSRAVVCRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLL--KQYVVADPEI--------KEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPIQDPEQAAKRLL 309          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.112e-16
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFI 604
            GSTA  A++  NHL VAN GDSR VIS+ G+A  LS DHKP+   E+ RI  AGG +  AG  RV G L ++RA G+            KQ V   P+    E+ D+ +F++LA +G+ D + ++  V  +
Sbjct:  321 GSTASTAVLVGNHLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGGVVMWAGTWRVGGVLAMSRAFGNRLL---------KQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLV 442          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.112e-16
Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = 2
Query:  197 SDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDF---IHDQLHSEKQIL 637
            SD +    GSTA  A++  + L VAN GDSR +I R G A  +S+DHKPD   E+ RI  AGGF+  AG  RV G L ++RA GD            KQ V   P+     +    +F++LA +G+ D +++++ VD    IHD   + K++L
Sbjct:  110 SDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD---------KLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLL 253          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.112e-16
Identity = 63/182 (34.62%), Postives = 92/182 (50.55%), Query Frame = 2
Query:   89 DKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGP-HSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGG---FIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHS 622
            D + K    ++G + +     S+D+P     ++ P   D AG    STA VA++    ++VANAGDSR VISR G    LS DHKPD   E  RI  AGG   +    RV G L ++RAIGD            K  VT  P+    E  DDD+ ++LA +G+ D ++++   + +    H+
Sbjct:  172 DVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAG----STAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGD---------GYLKPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNEMACEVVRACFHN 340          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: ILKAP_BOVIN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.112e-16
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVI------SRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEK 628
            GSTA   +  +N L +AN GDSR ++      S+K  A +LS++H P    E+ RI KAGG +  GRV G L ++R+IGD ++K+          VT  PD    +L  +D F++LAC+G+    + ++ V+FI   L  EK
Sbjct:  194 GSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEK 327          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.758e-16
Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 2
Query:  215 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            T G TA V ++    L +A+ GDSR V+SR G     + DH+P    E+ RI  AGG I   RV GSL ++RA+GD  +K+      E Q+V+  P+  ++    +D+F++LA +G+ D +S   L   +  +L
Sbjct:  160 TGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRL 293          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.758e-16
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVI------SRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEK 628
            GSTA   +  +N L +AN GDSR ++      S+K  A +LS++H P    E+ RI KAGG +  GRV G L ++R+IGD ++K+          VT  PD    +L  +D F++LAC+G+    + ++ V+FI   L  EK
Sbjct:  216 GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEK 349          
The following BLAST results are available for this feature:
BLAST of EY710288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PPM1K_XENLA1.238e-1637.33Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
PPM1K_BOVIN1.238e-1636.30Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
P2C51_ORYSJ1.617e-1643.31Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C10_ORYSJ1.617e-1640.82Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C52_ORYSJ2.112e-1640.46Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C45_ORYSJ2.112e-1637.91Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C09_ORYSJ2.112e-1634.62Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
ILKAP_BOVIN2.112e-1637.32Integrin-linked kinase-associated serine/threonine... [more]
PPMBL_HUMAN2.758e-1635.82Probable protein phosphatase 1B-like OS=Homo sapie... [more]
ILKAP_RAT2.758e-1637.32Integrin-linked kinase-associated serine/threonine... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710288 ID=EY710288; Name=EY710288; organism=Citrus sinensis; type=EST; length=1355bp
CCACGCGTCCGCGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAA
GGGACAAAGAGGATGGAGAGAATTAGCTGTTTNTGGGAGATAAAATAAAT
AAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGA
TAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTG
ATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGA
AACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATC
TAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACAAACCAGATCTTG
AAGCTGAGAAAGANAGGATATTGAAAGCTGGTGGATTTATACATGCAGGA
CGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATT
CAAGCAGAAACAATTTTTGTCTGCTGAAAAGCAAATTGTTACATGCCATC
CAGATAATAACTCTGTTGAGCTGTGTGATGATGATGATTTCGTTGTGCTG
GCGTGTGAAGGAATCTAGGATTGCTTGTCAAGCCAGCAATTAGTAGATTT
TATTCATGACCAACTACATTCGGAAAAGCAAATTCTGGCTGTGTGCAAAA
ATTACTCGAAAAATGTTTGGCCCCATCACAGCTTGGAGTTGAGGATGTGA
CAACTGAGCCTGATCTTAATGAGTTCAAAAACCATCCAGTCCCTTCCTCC
CTTCAAGCCAATGCCTTGGGATTCAATCAAAGACCCAGTCCCCACCAGAA
AAGGAATCAAATCCCGTGAATGACCCTATGCAGGTCCAATTCGGTTCTTT
CCACAAAAAACGAAACCTTTTTATAAATGGGAAAAGAGTGGTTTTGAAGG
CCCCCTGAAAAAAAAAAAAAAATGTTAAATCTTGTCTGTTGTGCTTCATT
CAGACCATAAATTCCTAACAATTAAGAGACACCACTCCCTTGTTTTAGGG
TATATTTTAGCAAAAAAAAGGGCCCAACACTAAAGTGGCAATTTTTCTAT
CGTATATGCGCATTTGGGGGAACGGACCATAATTCTCACTCGATGAAAAC
ATCCACCATAGAAGAGCGATAGGTGGAGTGAAGTTACCAACAACAAATAA
ACATGAATACCCACAAAAAAACACGTAATAAACTAAAGATATGATGTATT
GAGGAATGTCAGACAAGCATCTACAAAACATAACGAAAGATTGAAACAAA
TTGATCAAATTATATGTCTTGAAGATGTGTTCTGTAATAAAACAAAATAA
TACATCGTCATGTGGATAAAATCTTGACATGATGAAGTGGAGGACATTAG
TAAAT
back to top