EY710288

Overview
NameEY710288
Unique NameEY710288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1355
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.758e-16
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVI------SRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEK 628
            GSTA   +  +N L +AN GDSR ++      S+K  A +LS++H P    E+ RI KAGG +  GRV G L ++R+IGD ++K+          VT  PD    +L  +D F++LAC+G+    + ++ V+FI   L  EK
Sbjct:  216 GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEK 349          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.602e-16
Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEK 628
            +GSTA  AI+  + L+VAN GDSR VI R G A  +SRDHKPD   E+ RI  AGGF+  AG  RV G L ++RA GD            KQ V   P+     +    +F++LA +G+ D +++++ V  +   L SE+
Sbjct:  155 AGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD---------KLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQ 285          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.602e-16
Identity = 55/132 (41.67%), Postives = 76/132 (57.58%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFI 604
            +GSTA  AI+  + L+VAN GDSR VI R G A  +SRDHKPD   E+ RI  AGGF+  AG  RV G L ++RA GD            KQ V   P+    ++    +F++LA +G+ D +S+++ V  I
Sbjct:  124 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL---------KQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMI 246          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.705e-16
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGG---FIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCD-DDDFVVLACEGI*DCLSSQQLVDFIHDQLHS 622
            GSTA VA++   H++VAN GDSR V+ R G A  LS DHKPD   E  RI  AGG   F    RV G L ++RAIGD         S  K  V C P+   +E  D +D+F++LA +G+ D +S++   + +   L S
Sbjct:  191 GSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGD---------SYLKPYVICDPEVRVMERKDGEDEFLILASDGLWDVVSNEVACNVVRACLRS 319          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.144e-16
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVI------SRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEK 628
            GSTA   +  +N L +AN GDSR ++      S+K  A +LS++H P    E+ RI KAGG +  GRV G L ++R+IGD ++K+          VT  PD    +L  +D F++LAC+G+    + ++ V+FI   L  +K
Sbjct:  216 GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDDK 349          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 8.025e-16
Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = 2
Query:  215 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI---HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDF 601
            T GSTA VA++ ++H+IV+N GDSR V+ R   +  LS DHKPD E E  RI KAGG +      RV+G L ++R+IGD      Q+L   +  V   P+   +    +D+ ++LA +G+ D +S+Q+  DF
Sbjct:  324 TVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGARVSGVLAMSRSIGD------QYL---EPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDF 446          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PP2C4_YEAST (Protein phosphatase 2C homolog 4 OS=Saccharomyces cerevisiae GN=PTC4 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.048e-15
Identity = 64/168 (38.10%), Postives = 86/168 (51.19%), Query Frame = 2
Query:  182 EEGPHSDFAGPTSGSTACVA-IIRNNHLIVANAGDSRCVISRKGQAYN-LSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQ--------------KQFLS----AEKQIVTCHPDNNSVEL-CDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHS 622
            +E  +  FA  + GSTA VA II    L VAN GDSRC++S K      +S DHKP    E  RI   GG +  GRV G L L+RA  D +FK+               Q L+     ++  VT  PD    ++    D+F+VLAC+GI D  +++QL+ FI   L S
Sbjct:  164 DEELYRHFANSSCGSTAVVACIINEESLYVANCGDSRCILSSKSNGIKTMSFDHKPQHIGELIRINDNGGTVSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKLTNITQNLTYGTPPQEAQVTVEPDVLMHKIDYSKDEFLVLACDGIWDIYNNKQLIHFIKYHLVS 331          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.049e-15
Identity = 58/134 (43.28%), Postives = 79/134 (58.96%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGF-IHAG--RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHD 610
            +GSTA  A +  + LIVAN GDSR V SR G A  LS DHKPD   E+ RI  AGGF I AG  RV G L ++RA GD +   K ++ AE +I     D +++E      F+V+A +G+ + LS++  V  + D
Sbjct:  214 AGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQL--KPYVIAEPEIQ--EEDISTLE------FIVVASDGLWNVLSNKDAVAIVRD 337          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.049e-15
Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  221 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGG---FIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQ 586
            GSTA V++I    +IVAN GDSR V+ R G+A  LS DHKPD   E  RI +AGG   +    RV G L ++RAIGD         +  K  VT  P+    +  ++D+F++LA +G+ D ++++
Sbjct:  233 GSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGD---------NYLKPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNE 348          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PP2C1_SCHPO (Protein phosphatase 2C homolog 1 OS=Schizosaccharomyces pombe GN=ptc1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.983e-15
Identity = 49/137 (35.77%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  221 GSTACVAIIRNNH------LIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCD-DDDFVVLACEGI*DCLSSQQLVDFIHD 610
            G TA VA  R         L  ANAGD+R V+ R G+A  LS DHK     E  R+ + GG +   R+NG L + RA+GD            K++V+ HP      + +  D+F ++AC+G+ D +S Q+ VDF+ +
Sbjct:  165 GCTAAVAFFRYEKNRTRRVLYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQNRINGVLAVTRALGDTYL---------KELVSAHPFTTETRIWNGHDEFFIIACDGLWDVVSDQEAVDFVRN 292          
The following BLAST results are available for this feature:
BLAST of EY710288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
ILKAP_HUMAN2.758e-1637.32Integrin-linked kinase-associated serine/threonine... [more]
P2C59_ORYSJ3.602e-1640.00Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C59_ARATH3.602e-1641.67Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C30_ORYSJ4.705e-1641.30Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
ILKAP_MOUSE6.144e-1636.62Integrin-linked kinase-associated serine/threonine... [more]
P2C07_ARATH8.025e-1640.15Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
PP2C4_YEAST1.048e-1538.10Protein phosphatase 2C homolog 4 OS=Saccharomyces ... [more]
P2C11_ARATH3.049e-1543.28Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C03_ARATH3.049e-1540.00Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
PP2C1_SCHPO3.983e-1535.77Protein phosphatase 2C homolog 1 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710288 ID=EY710288; Name=EY710288; organism=Citrus sinensis; type=EST; length=1355bp
CCACGCGTCCGCGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAA
GGGACAAAGAGGATGGAGAGAATTAGCTGTTTNTGGGAGATAAAATAAAT
AAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGA
TAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTG
ATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGA
AACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATC
TAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACAAACCAGATCTTG
AAGCTGAGAAAGANAGGATATTGAAAGCTGGTGGATTTATACATGCAGGA
CGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATT
CAAGCAGAAACAATTTTTGTCTGCTGAAAAGCAAATTGTTACATGCCATC
CAGATAATAACTCTGTTGAGCTGTGTGATGATGATGATTTCGTTGTGCTG
GCGTGTGAAGGAATCTAGGATTGCTTGTCAAGCCAGCAATTAGTAGATTT
TATTCATGACCAACTACATTCGGAAAAGCAAATTCTGGCTGTGTGCAAAA
ATTACTCGAAAAATGTTTGGCCCCATCACAGCTTGGAGTTGAGGATGTGA
CAACTGAGCCTGATCTTAATGAGTTCAAAAACCATCCAGTCCCTTCCTCC
CTTCAAGCCAATGCCTTGGGATTCAATCAAAGACCCAGTCCCCACCAGAA
AAGGAATCAAATCCCGTGAATGACCCTATGCAGGTCCAATTCGGTTCTTT
CCACAAAAAACGAAACCTTTTTATAAATGGGAAAAGAGTGGTTTTGAAGG
CCCCCTGAAAAAAAAAAAAAAATGTTAAATCTTGTCTGTTGTGCTTCATT
CAGACCATAAATTCCTAACAATTAAGAGACACCACTCCCTTGTTTTAGGG
TATATTTTAGCAAAAAAAAGGGCCCAACACTAAAGTGGCAATTTTTCTAT
CGTATATGCGCATTTGGGGGAACGGACCATAATTCTCACTCGATGAAAAC
ATCCACCATAGAAGAGCGATAGGTGGAGTGAAGTTACCAACAACAAATAA
ACATGAATACCCACAAAAAAACACGTAATAAACTAAAGATATGATGTATT
GAGGAATGTCAGACAAGCATCTACAAAACATAACGAAAGATTGAAACAAA
TTGATCAAATTATATGTCTTGAAGATGTGTTCTGTAATAAAACAAAATAA
TACATCGTCATGTGGATAAAATCTTGACATGATGAAGTGGAGGACATTAG
TAAAT
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