EY710288

Overview
NameEY710288
Unique NameEY710288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1355
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.372e-14
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 2
Query:  206 AGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI---HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            A  T GST+ VA++   H+ VAN GDSR V+ R      LS DHKPD + E  RI  AGG +   +  RV G L ++R+IGD   K           V   P+  SV    +DD ++LA +G+ D ++++++ D    ++
Sbjct:  226 APETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKPS---------VIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRI 356          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.372e-14
Identity = 49/140 (35.00%), Postives = 76/140 (54.29%), Query Frame = 2
Query:  206 AGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI---HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            A  T GST+ VA++  +H+ VAN GDSR V+ R   A  LS DHKPD E E  RI  AGG +   +  RV G L ++R+IGD   K           +   P+  +V+   +DD ++LA +G+ D ++ ++  +    ++
Sbjct:  236 APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPS---------IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRI 366          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.372e-14
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 2
Query:  218 SGSTACV-AIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI----HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVD 598
            SG   CV A+++   L+V+NAGD R V+SR G+A  L+ DH+   E E+ RI   GGF+       RV GSL ++R IGD            KQ V   PD  ++ +    +F++LA +G+ D + +Q+ VD
Sbjct:  223 SGGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHL---------KQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQEAVD 345          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.372e-14
Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  215 TSGSTACVAIIRNNHLI-VANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDF---IHDQLHSEKQILA 640
            + GSTA  AI+ N   + +AN GDSR ++S +G+A  +S DH PD + E+  I   GGF+        RVNG L ++R  GD     K +L++E       P+   V +    DF++LA +GI   +S+Q+ VD    + D   + +Q++A
Sbjct:  123 SGGSTAVTAILINGKALWIANVGDSRAIVSSRGKAKQMSVDHDPDDDTERSMIESKGGFVTNRPGDVPRVNGLLAVSRVFGDKNL--KAYLNSE-------PEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAKKLKDPKEAARQVVA 264          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.372e-14
Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  206 AGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI---HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVD 598
            A  T GSTA VA++ ++H++V+N GDSR V+ R  +A  LS DHKPD E E  RI  AGG +      RV G L ++R+IGD            K  V   P+   +    +D+ ++LA +G+ D +++Q++ +
Sbjct:  321 ASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCE 445          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.403e-14
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRK-GQAYNLSRDHKPDLEAEKXRILKAGGFIH---AGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            +G+T  +A++ +  L VAN GDSR V+  K G A  LS DHKP    E+ RI +AGGFI    + RV G L ++R++GD   K    +  +  I+T   D    E      F++LA +G+ D  S+++ V FI ++L
Sbjct:  191 AGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPE------FMILASDGLWDAFSNEEAVRFIKERL 321          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.403e-14
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRK-GQAYNLSRDHKPDLEAEKXRILKAGGFIH---AGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQL 616
            +G+T  +A++ +  L VAN GDSR V+  K G A  LS DHKP    E+ RI +AGGFI    + RV G L ++R++GD   K    +  +  I+T   D    E      F++LA +G+ D  S+++ V FI ++L
Sbjct:  191 AGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPE------FMILASDGLWDAFSNEEAVRFIKERL 321          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.403e-14
Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 2
Query:  209 GPTSGSTACVAIIRNNHLIVANAGDSRCVI-SRKGQAYNLSRDHKPDLEAEKXRILKAGGFIHAG-----RVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDD--FVVLACEGI*DCLSSQQLVDFI 604
            G   G+ A  A++++  L V+N GD R V+ SR G A  L+ DH P  E E+ RI   GG++  G     RV  SL ++RA GD         +  KQ VTC P+   V L  D D  F+VLA +G+   +S+Q+ VD +
Sbjct:  245 GVRGGACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGD---------AGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAVDAV 375          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.403e-14
Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 2
Query:  221 GSTACVAIIRN-NHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDD-DFVVLACEGI*DCLSSQQLVDFI 604
            GSTA  AI+ N   L+VAN GDSR VI + G A  LS DH+P++  EK  I   GGF+        RV+G L +ARA GD     K  LS+E  +        +VE+ DDD +F++LA +G+   +S+Q+ VD I
Sbjct:  133 GSTAVTAILINCQKLVVANVGDSRAVICQNGVAKPLSVDHEPNM--EKDEIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSL--KMHLSSEPYV--------TVEIIDDDAEFLILASDGLWKVMSNQEAVDSI 255          
BLAST of EY710288 vs. ExPASy Swiss-Prot
Match: PPM1F_RAT (Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.751e-14
Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = 2
Query:  218 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKXRILKAGGFI---HAGRVNGSLNLARAIGDMEFKQKQFLSAEKQIVTCHPDNNSVELCDDDDFVVLACEGI*DCLSSQQLVDFIHDQLHSEK 628
            SG+T   A+I    L VA  GDS+ ++ ++GQ   L   HKP+ + EK RI   GGF+      RVNG+L ++RAIGD+   QK ++S E        D  S EL   +D+++LAC+G  D +   ++   +H  L  +K
Sbjct:  249 SGTTGVCALITGAALHVAWLGDSQVILVQQGQVVKLMEPHKPERQDEKSRIEALGGFVSLMDCWRVNGTLAVSRAIGDV--FQKPYVSGE-------ADAASRELTGLEDYLLLACDGFFDVVPHHEIPGLVHGHLLRQK 379          
The following BLAST results are available for this feature:
BLAST of EY710288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
P2C77_ARATH3.372e-1435.71Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C56_ARATH3.372e-1435.00Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C32_ORYSJ3.372e-1437.12Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C17_ARATH3.372e-1434.44Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C16_ARATH3.372e-1436.57Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
PPM1L_MOUSE4.403e-1437.23Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
PPM1L_HUMAN4.403e-1437.23Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]
P2C77_ORYSJ4.403e-1437.86Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C39_ARATH4.403e-1442.22Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
PPM1F_RAT5.751e-1436.43Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710288 ID=EY710288; Name=EY710288; organism=Citrus sinensis; type=EST; length=1355bp
CCACGCGTCCGCGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAA
GGGACAAAGAGGATGGAGAGAATTAGCTGTTTNTGGGAGATAAAATAAAT
AAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGA
TAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTG
ATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGA
AACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATC
TAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACAAACCAGATCTTG
AAGCTGAGAAAGANAGGATATTGAAAGCTGGTGGATTTATACATGCAGGA
CGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATT
CAAGCAGAAACAATTTTTGTCTGCTGAAAAGCAAATTGTTACATGCCATC
CAGATAATAACTCTGTTGAGCTGTGTGATGATGATGATTTCGTTGTGCTG
GCGTGTGAAGGAATCTAGGATTGCTTGTCAAGCCAGCAATTAGTAGATTT
TATTCATGACCAACTACATTCGGAAAAGCAAATTCTGGCTGTGTGCAAAA
ATTACTCGAAAAATGTTTGGCCCCATCACAGCTTGGAGTTGAGGATGTGA
CAACTGAGCCTGATCTTAATGAGTTCAAAAACCATCCAGTCCCTTCCTCC
CTTCAAGCCAATGCCTTGGGATTCAATCAAAGACCCAGTCCCCACCAGAA
AAGGAATCAAATCCCGTGAATGACCCTATGCAGGTCCAATTCGGTTCTTT
CCACAAAAAACGAAACCTTTTTATAAATGGGAAAAGAGTGGTTTTGAAGG
CCCCCTGAAAAAAAAAAAAAAATGTTAAATCTTGTCTGTTGTGCTTCATT
CAGACCATAAATTCCTAACAATTAAGAGACACCACTCCCTTGTTTTAGGG
TATATTTTAGCAAAAAAAAGGGCCCAACACTAAAGTGGCAATTTTTCTAT
CGTATATGCGCATTTGGGGGAACGGACCATAATTCTCACTCGATGAAAAC
ATCCACCATAGAAGAGCGATAGGTGGAGTGAAGTTACCAACAACAAATAA
ACATGAATACCCACAAAAAAACACGTAATAAACTAAAGATATGATGTATT
GAGGAATGTCAGACAAGCATCTACAAAACATAACGAAAGATTGAAACAAA
TTGATCAAATTATATGTCTTGAAGATGTGTTCTGTAATAAAACAAAATAA
TACATCGTCATGTGGATAAAATCTTGACATGATGAAGTGGAGGACATTAG
TAAAT
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