EY684920

Overview
NameEY684920
Unique NameEY684920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length965
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_PORPU (Photosystem I reaction center subunit II OS=Porphyra purpurea GN=psaD PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.886e-47
Identity = 93/140 (66.43%), Postives = 105/140 (75.00%), Query Frame = 1
Query:   88 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504
            P  ++ N PSP FGGSTGG LR A+VEE Y ITW    E  FEMPTGG A MR+G NLL LA+KEQCLALGT+L+ K+KI  Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR  +     SIGKNV+PI VKFT K  YD
Sbjct:    2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLYLAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDHSIGKNVNPINVKFTNKATYD 141          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_PORYE (Photosystem I reaction center subunit II OS=Porphyra yezoensis GN=psaD PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.223e-46
Identity = 91/140 (65.00%), Postives = 105/140 (75.00%), Query Frame = 1
Query:   88 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504
            P  ++ N PSP FGGSTGG LR A+VEE Y ITW    E  FEMPTGG A MR G NLL LA+KEQCLALGT+L+SK+KI  Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR  V     SIG+N++P++VKF  K  YD
Sbjct:    2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRNGENLLYLAKKEQCLALGTQLKSKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNTGRASVNSVDHSIGQNINPVDVKFMNKATYD 141          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_ODOSI (Photosystem I reaction center subunit II OS=Odontella sinensis GN=psaD PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.724e-46
Identity = 92/136 (67.65%), Postives = 104/136 (76.47%), Query Frame = 1
Query:   97 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504
            L+  TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LARKEQCLALGT+LR+     Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR  V     SIGKN +P  +KF+G   Y+
Sbjct:    3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_SKECO (Photosystem I reaction center subunit II OS=Skeletonema costatum GN=psaD PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.011e-45
Identity = 90/136 (66.18%), Postives = 103/136 (75.74%), Query Frame = 1
Query:   97 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504
            L+  TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LARKEQCLAL T+LR+     Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR  V     SIGKN +P  +KF+G   Y+
Sbjct:    3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSAKEQIFEMPTGGSAIMRNGENLLYLARKEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_MASLA (Photosystem I reaction center subunit II OS=Mastigocladus laminosus GN=psaD PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.933e-45
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1
Query:  115 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504
            +PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MR+G NLL LARKEQC+ALG++LR      Y+ YR++PNGE  Y+HP DGV+PEKVNPGR+ V  N R IG+N  P ++KF+G   YD
Sbjct:    9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLARKEQCIALGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAKLKFSGVATYD 138          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_SYNY3 (Photosystem I reaction center subunit II OS=Synechocystis sp. (strain PCC 6803) GN=psaD PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 6.709e-45
Identity = 89/133 (66.92%), Postives = 103/133 (77.44%), Query Frame = 1
Query:  118 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 507
            P FGGSTGGLL KA  EE Y ITW S  EQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K K   Y+ YRV+P+GEVQYLHP DGV+PEKVN GRE  G   R IG+N  P+ +KF+GK  Y++
Sbjct:    9 PKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEPVTIKFSGKAPYEV 141          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_SYNP6 (Photosystem I reaction center subunit II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaD PE=1 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 1.071e-42
Identity = 84/132 (63.64%), Postives = 101/132 (76.52%), Query Frame = 1
Query:  115 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVY 501
            +P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NLL  ARKEQ LALGT+LR+K+K K   Y+ YR FP  +V YLHPKDGV+PEKVN GR   G+  R IG+N +P  +KFTGKQ Y
Sbjct:    9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALALGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPNPATIKFTGKQPY 140          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_CYACA (Photosystem I reaction center subunit II OS=Cyanidium caldarium GN=psaD PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.877e-41
Identity = 80/136 (58.82%), Postives = 103/136 (75.74%), Query Frame = 1
Query:   97 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVY 501
            L+   PSP F G+TGG LR + +EE Y ITW S  E IFE+PTGG A M+ G NLL LA+KEQCLALG +L+ K+KI  ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G+   +IGKN++P EVKFT K ++
Sbjct:    5 LNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIGKNLNPAEVKFTHKTIF 140          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_THEVL (Photosystem I reaction center subunit II OS=Thermosynechococcus vulcanus GN=psaD PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 7.676e-41
Identity = 81/130 (62.31%), Postives = 98/130 (75.38%), Query Frame = 1
Query:  118 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504
            P++GGSTGGLL  A  EE Y ITW SPKEQ+FEMPT GAA+MREG NL+  ARKEQCLAL   +LR +    Y+ YR+FP+GE   +HPKDGV+PEKVN GRE V    RSIG+N +P ++KFTGK+ YD
Sbjct:    9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138          
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_THEEB (Photosystem I reaction center subunit II OS=Thermosynechococcus elongatus (strain BP-1) GN=psaD PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 7.676e-41
Identity = 81/130 (62.31%), Postives = 98/130 (75.38%), Query Frame = 1
Query:  118 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504
            P++GGSTGGLL  A  EE Y ITW SPKEQ+FEMPT GAA+MREG NL+  ARKEQCLAL   +LR +    Y+ YR+FP+GE   +HPKDGV+PEKVN GRE V    RSIG+N +P ++KFTGK+ YD
Sbjct:    9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138          
The following BLAST results are available for this feature:
BLAST of EY684920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
PSAD_PORPU1.886e-4766.43Photosystem I reaction center subunit II OS=Porphy... [more]
PSAD_PORYE1.223e-4665.00Photosystem I reaction center subunit II OS=Porphy... [more]
PSAD_ODOSI2.724e-4667.65Photosystem I reaction center subunit II OS=Odonte... [more]
PSAD_SKECO3.011e-4566.18Photosystem I reaction center subunit II OS=Skelet... [more]
PSAD_MASLA3.933e-4565.38Photosystem I reaction center subunit II OS=Mastig... [more]
PSAD_SYNY36.709e-4566.92Photosystem I reaction center subunit II OS=Synech... [more]
PSAD_SYNP61.071e-4263.64Photosystem I reaction center subunit II OS=Synech... [more]
PSAD_CYACA5.877e-4158.82Photosystem I reaction center subunit II OS=Cyanid... [more]
PSAD_THEVL7.676e-4162.31Photosystem I reaction center subunit II OS=Thermo... [more]
PSAD_THEEB7.676e-4162.31Photosystem I reaction center subunit II OS=Thermo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684920 ID=EY684920; Name=EY684920; organism=Citrus sinensis; type=EST; length=965bp
CATAATGCCCCACGTACCCACACCATCAAGGCCATGGCTGAGGGAAAAAC
AGAGACACCCACAAAAGAGGCTCCGGTGGGCTTCACCCCACCAGAACTGG
ACCCCAACACCCCATCTCCGATCTTCGGAGGCAGCACCGGCGGGCTGCTG
CGGAAGGCTCAGGTGGAAGAGTTTTATGTGATCACATGGGAGTCTCCTAA
GGAGCAAATATTTGAAATGCCCACTGGGGGTGCGGCCATTATGAGAGAAG
GTCCGAATTTGCTGAAGCTGGCTAGGAAAGAGCAGTGCTTGGCTCTGGGG
ACAAGGCTGAGGTCCAAGTACAAGATTAAGTACCAGTTTTACCGAGTGTT
TCCCAATGGAGAGGTTCAGTATTTGCATCCCAAGGATGGTGTTTATCCTG
AGAAAGTGAACCCTGGAAGGGAAGGAGTTGGGCAGAATTACAGGTCTATT
GGTAAGAATGTGAGTCCTATTGAGGTCAAGTTTACAGGGAAGCAAGTGTA
TGATCTGTAAATTTAAATTGGAAGCTGCTAAGCTGACGGGCCTCCGATGA
TCTGTTGATTAATTGTTGTGATCATTTACTTGTATCTATCCGTGCTTTCA
TTCCCCCAAAAATATTGTAATGAAGGCCAAACTAGATCACTACAAACTAT
TTTAAACCGGCGAAATCCCCTTTCTACTATTACACGAGAAATGGGAATCT
AGAAAAGCTTGAAAACGAATCAGAAAACACGGGGAGATGGATACCATAAG
CTTACGAAGGCATTGGCCCCCAACCAGGAGGAAACGAGAGAACGACACGC
CAGGACAACGATGCACGCCGTCCCAAACCACCTCAGACTCTCCTCGCCGG
ACCCTGAGCAACAACCGCGAAGAAGAAAACCACTACACGCCACCAGACCC
CAATCGCAATCCGCATCGAATGCCACAAGCGACGAAAAAACAACCAAGCC
CACGAGATACCGCGG
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