EY684920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_SYNEN (Photosystem I reaction center subunit II OS=Synechococcus elongatus naegeli GN=psaD PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 7.676e-41 Identity = 81/130 (62.31%), Postives = 98/130 (75.38%), Query Frame = 1 Query: 118 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GRE V RSIG+N +P ++KFTGK+ YD Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_NOSS8 (Photosystem I reaction center subunit II OS=Nostoc sp. (strain PCC 8009) GN=psaD PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.809e-40 Identity = 83/131 (63.36%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 115 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504 +P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M +G NLL LARKEQ +ALG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GRE V R IG+N SP ++KF+GK YD Sbjct: 8 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIALGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPAQLKFSGKYTYD 137
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_ANAVT (Photosystem I reaction center subunit II OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaD PE=1 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 4.975e-40 Identity = 82/131 (62.60%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 115 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGRE V N RSIG+N +P +VKF+GK YD Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNPGREKVRFNARSIGENPNPSQVKFSGKATYD 138
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_ANASP (Photosystem I reaction center subunit II OS=Anabaena sp. (strain PCC 7120) GN=psaD PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 4.212e-39 Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 115 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GRE V N RSIG+N +P +VKF+GK YD Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRFNARSIGENPNPSQVKFSGKATYD 138
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_GLOVI (Photosystem I reaction center subunit II OS=Gloeobacter violaceus GN=psaD PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.730e-38 Identity = 82/139 (58.99%), Postives = 101/139 (72.66%), Query Frame = 1 Query: 94 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 507 EL +P+FGGSTGGLLRKAQ+EE Y+I W S +EQ+FEMPTGGAA M G N+L LARKEQC AL +L S +KI+ + YRV+PNGE + P DGV EK NPGRE VG R IG N +P++VKFTGK+ +D+ Sbjct: 6 ELPFGGSTPLFGGSTGGLLRKAQIEEKYLIVWNSKEEQVFEMPTGGAATMVAGTNVLYLARKEQCHALHRQLVSTFKIRDSKIYRVYPNGEQVLIFPMDGVPSEKSNPGREVVGYVPRKIGDNPNPVDVKFTGKETFDV 144
BLAST of EY684920 vs. ExPASy Swiss-Prot
Match: PSAD_FREDI (Photosystem I reaction center subunit II OS=Fremyella diplosiphon GN=psaD PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.037e-37 Identity = 79/131 (60.31%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 115 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 504 +P+F GSTGGLL+KA+VEE Y ITW SPK Q+FE+PTGGAA M++G NLL LARKE +ALG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GRE V R IG+N +P +KF+GK YD Sbjct: 8 TPLFAGSTGGLLKKAEVEEKYAITWTSPKAQVFELPTGGAATMQQGQNLLYLARKEYGIALGGQLR-KFKITDYKIYRILPGGETTLIHPADGVFPEKVNAGREKVRFVPRRIGENPNPSAIKFSGKYTYD 137 The following BLAST results are available for this feature:
BLAST of EY684920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684920 ID=EY684920; Name=EY684920; organism=Citrus sinensis; type=EST; length=965bpback to top |