EY710283

Overview
NameEY710283
Unique NameEY710283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.602e-18
Identity = 56/94 (59.57%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTA 487
            SG TA V +   N L  ANAGDSR V+  KG A  LS DHKP  EAEK RI  AGGF+  GRVNG+L L+RAIGD EFK N  L  EK ++VTA
Sbjct:  118 SGCTATVVLRVGNKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFGRVNGNLALSRAIGDFEFK-NSNLEPEK-QIVTA 209          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.569e-18
Identity = 65/181 (35.91%), Postives = 91/181 (50.28%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRK-GQAYNLSRDHKP-DLEAEKERILKAGGFIHA------------------GRVNGSLNLARAIGDMEFKQNKFLSAEKAKLV 481
            +   FF MDE ++    WREL +  D          G ++  + G      N W F +     + GP   GSTACV +IR + +IV +AGDSRCV+SR+ G A +LS DHKP   E+E+ER+  AGG                      G    S+ ++R+IGD  FKQNK L+ E+  L+
Sbjct:  198 LDNVFFSMDENLQQSDAWRELVIPRDN---------GWMYFLKAGVC---ANFWPFPQA----YTGPAYEGSTACVVVIRGDQMIVGHAGDSRCVLSRQGGLAIDLSSDHKPRTSESERERVQNAGGISLGVDCEKVMENYVIKEQWILGYFGESVTISRSIGDFAFKQNKDLNREEQMLI 362          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 7.950e-18
Identity = 65/178 (36.52%), Postives = 92/178 (51.69%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHA-------GR-----------VNGSLNLARAIGDMEFKQNKFLSAEKAKL 478
            ++ AF+ MDE ++    WREL +   + N +   I+       G  +N  P        P + +  P+  GSTACV +IR + LIV +AGDSRCV+SR GQA  LS DHKPD E+E+ER+  AGG           GR             G ++++R+IGD   K+N+ L  E   L
Sbjct:  138 MRSAFYSMDEDLQLSDAWRELVI--PRNNGWMYFIKA------GVCANLSPF-------PQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQML 300          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.730e-17
Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 2
Query:  158 DWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK 451
            D+ F +    D +   SG+TA  A I    LI+ANAGD R V+ R+G+A  LS+DHKP+  AEK RI K GG ++ G +NG L++ARAIGD   K  K
Sbjct:  169 DYEFADDSSLDIS---SGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYDGYLNGQLSVARAIGDWHMKGPK 263          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.790e-17
Identity = 63/182 (34.62%), Postives = 87/182 (47.80%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRK-GQAYNLSRDHKP--DLEAEKERILKAGGFIHA------------------GRVNGSLNLARAIGDMEFKQNKFLSAEKAKLV 481
            +   F  MDE ++    WREL +  D          G ++  + G           +  P + + GP   GSTACV +IR N +IV + GDSRCV+SR+ G A +LS DHKP    E+E+ER+  AGG                      G   G + ++R+IGD  FK+NK L  EK  LV
Sbjct:   90 LDNVFLSMDENLQQSDAWRELVIPHDN---------GCMYFLKAGV--------CAKPFPQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGGRSLGLRCEQVMGNYVVKEQWVLGDFGGGVTISRSIGDFAFKKNKDLDREKQMLV 254          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.340e-16
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 2
Query:  203 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            +SG+TA  A+I    L+VANAGD R V+ RKG A  +SRDH+P  +AE ERI + GG+I  G +NG L++ RA+GD + K
Sbjct:  176 SSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYIEDGYLNGVLSVTRALGDWDMK 255          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.363e-16
Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 2
Query:  203 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK 451
            +SG+TA  A+I +  +++ANAGDSR V+ ++G+A  LS+DHKP+  +E+ RI K GG I+ G +NG L++ARA+GD   K  K
Sbjct:  164 SSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTK 246          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.658e-15
Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = 2
Query:  206 SGSTACVAIIRN--NHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEK 469
            SG TA   ++    N L+  NAGDSR V++  G A  LS DHKP L +EK RI+ A GF+   RVNG+L L+RAIGD EFK N  L  E+
Sbjct:  118 SGCTATSILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNPKLGPEE 207          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.165e-15
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  158 DWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK 451
            D AF E    D     SG+TA  AI+    L+VANAGD R V+SR+G+A  +SRDHKP    E+ RI  +GG +  G +NG LN+ARA+GD   +  K
Sbjct:  174 DTAFLEACSLD-GSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMK 270          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.693e-15
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK 451
            SG+TA  A++    L+VANAGD R V+  +G+A  +SRDHKP    EK RI  +GG+++ G +NG LN+ARAIGD   +  K
Sbjct:  167 SGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMK 248          
The following BLAST results are available for this feature:
BLAST of EY710283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PP2C3_SCHPO1.602e-1859.57Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]
P2C18_ORYSJ3.569e-1835.91Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]
P2C20_ORYSJ7.950e-1836.52Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C27_ARATH6.730e-1747.96Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C16_ORYSJ8.790e-1734.62Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
P2C02_ORYSJ3.340e-1651.25Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
P2C47_ARATH4.363e-1648.19Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
PP2C2_YEAST1.658e-1551.11Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
P2C22_ARATH2.165e-1546.94Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C57_ORYSJ3.693e-1548.78Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710283 ID=EY710283; Name=EY710283; organism=Citrus sinensis; type=EST; length=1056bp
CGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAAGGGACAAAGAG
GATGGAGAGAATTAGCTGTTTTGGGAGATAAAATAAATAAATTCACTGGC
ATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGATAGTAATGATCA
ACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTGATTTTGCTGGAC
CAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGAAACAATCATCTC
ATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATCTAGAAAGGGCCA
GGCATATAATCTCTCAAGAGATCACAAACCAGATCTTGAAGCTGAGAAAG
AAAGGATATTGAAAGCTGGTGGATTTATACATGCAGGACGAGTCAATGGT
AGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATTCAAGCAGAACAA
ATTTTTGTCTGCTGAAAAAGCAAAATTGGTTACTGCCCAATCCAAATATA
AACTCTGTTGAACTGTGTGATGAATGATGATTTTCGTTGGTGCTGGCGTG
GTGATGGGATCCGGGGAATTGCATGTCCAGCCCGCAATTTAGTAAAATTT
TTATTCCTGAACAACTTCCTTTCCGGAAAAAGCAAGATTTTTCTGGCTGG
TGTTGCCAAAAAATTACTCCAGAAAAAGTTTTGGCCCCCATCCACCCGCC
TGGAGGGGGGAAGGGATGGGGCAACCTTGACCATGAATCAAAAGTGGCAG
TTCAAGAAAAACCCAATCCCAGTCCCCCTTTCCCCCCCTTTTAAGTACAA
ACTTTCCCTTGGGAATTTTCAAACCAAAATGACTCTCATTCCCCCTCACC
CCCGAAAAAAATGGAAATACAAGAATTTGCCCCCCGGTATAAAGGTAACC
CCCCATTATGACCAGGGGGTCCCACCAATTATTCTGGGGTATCCCTCTTT
TCCCCCCAAATAAAAAAAAAGATTGAAAAAAAAAAACCCCCTCTTTTTTT
TATGAATTAAAAAAAAAAAATTGATGAGAATAATAACAAAAAAAAAATGA
CGTGTG
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