EY710283

Overview
NameEY710283
Unique NameEY710283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 6.300e-15
Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTA 487
            SG+TA V +I+   +   NAGDSR V S  G+A  LS DHKP  E E  RI+ AGG++   RVNG+L L+RA+GD  FK      AE+ ++VTA
Sbjct:  115 SGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEE-QIVTA 207          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 8.227e-15
Identity = 47/83 (56.63%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQ 445
            +GSTA  AI+  + L+VAN GDSR VISR G+A  +SRDHKPD   E+ERI  AGGF+  AG  RV G L ++RA GD   KQ
Sbjct:  124 AGSTASTAILVGDRLVVANVGDSRAVISRGGKAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ 206          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.403e-14
Identity = 61/174 (35.06%), Postives = 85/174 (48.85%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRK-GQAYNLSRDHKP--DLEAEKERILKAGG---FIHAGRVNGSLNLAR-------AIGDMEFKQNKFLSAEKAKLV 481
            +   F  MDE ++    WREL +  D          G ++  + G           +  P + + GP   GSTACV +IR N +IV + GDSRCV+SR+ G A +LS DHKP    E+E+ER+  AGG    +   +V G+  +           GD  FK+NK L  EK  LV
Sbjct:  114 LDNVFLSMDENLQQSDAWRELVIPHDN---------GCMYFLKAGV--------CAKPFPQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGGRSLGLRCEQVMGNYVVKEQWVLGDFGGGDFAFKKNKDLDREKQMLV 270          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.833e-14
Identity = 44/83 (53.01%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  206 SGSTACVAIIRN--NHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQN 448
            SG TA V ++      LI AN+GDSR V+S  G +  +S DHKP L +EK RI+ A GF+   RVNG+L L+RAIGD EFK N
Sbjct:  118 SGCTATVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSN 200          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.833e-14
Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQ 445
            +GSTA  AI+  + L+VAN GDSR VI R G A+ +SRDHKPD   E+ERI  AGGF+  AG  RV G L ++RA GD   KQ
Sbjct:  124 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ 206          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1K_PONAB (Protein phosphatase 1K, mitochondrial OS=Pongo abelii GN=PPM1K PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.965e-14
Identity = 42/101 (41.58%), Postives = 64/101 (63.37%), Query Frame = 2
Query:  203 TSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTA 487
            TSG+TA VA++R+   L+VA+ GDSR ++ RKG+   L+ DH P+ + EKERI K GGF+         VNG L + R+IGD++ K +  ++  + K + A
Sbjct:  185 TSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKA 285          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.188e-13
Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  203 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            +SG+TA  A++    L+VANAGD R V+ R+G A  +SRDH+ +   E ER+  +GG+I  G +NG L++ RA+GD + K
Sbjct:  183 SSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYIEDGYLNGVLSVTRALGDWDMK 262          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.188e-13
Identity = 62/165 (37.58%), Postives = 86/165 (52.12%), Query Frame = 2
Query:   26 DEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGP-HSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTAQSKYKLC 508
            +E  KG  G  E+A   D + K    ++G + +     S+D+P     ++ P   D AG    STA VA++    ++VANAGDSR VISR G    LS DHKPD   E ERI  AGG   +    RV G L ++RAIGD   K   ++++E    VT ++    C
Sbjct:  157 EEHNKGASG--EVAPWRDVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAG----STAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYLK--PYVTSEPEVTVTERTDDDEC 313          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.552e-13
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  203 TSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLV 481
            TSG+TA VA++R+   L+VA+ GDSR ++ RKG+   L+ DH P+ + EKERI K GGF+         VNG L + R+IGD++ K +  ++  + K +
Sbjct:  185 TSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRI 283          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.552e-13
Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA  A++ ++H+IVAN GDSR V+ R G A  LS DHKPD   E+ RI  AGG    +   RV G L  +RAIGD   K
Sbjct:  230 SGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYLK 311          
The following BLAST results are available for this feature:
BLAST of EY710283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PP2C2_CAEEL6.300e-1548.94Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
P2C69_ARATH8.227e-1556.63Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C17_ORYSJ1.403e-1435.06Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
PP2C3_YEAST1.833e-1453.01Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
P2C71_ARATH1.833e-1455.42Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
PPM1K_PONAB6.965e-1441.58Protein phosphatase 1K, mitochondrial OS=Pongo abe... [more]
P2C47_ORYSJ1.188e-1345.00Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
P2C09_ORYSJ1.188e-1337.58Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
PPM1K_HUMAN1.552e-1341.41Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
P2C75_ARATH1.552e-1351.22Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710283 ID=EY710283; Name=EY710283; organism=Citrus sinensis; type=EST; length=1056bp
CGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAAGGGACAAAGAG
GATGGAGAGAATTAGCTGTTTTGGGAGATAAAATAAATAAATTCACTGGC
ATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGATAGTAATGATCA
ACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTGATTTTGCTGGAC
CAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGAAACAATCATCTC
ATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATCTAGAAAGGGCCA
GGCATATAATCTCTCAAGAGATCACAAACCAGATCTTGAAGCTGAGAAAG
AAAGGATATTGAAAGCTGGTGGATTTATACATGCAGGACGAGTCAATGGT
AGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATTCAAGCAGAACAA
ATTTTTGTCTGCTGAAAAAGCAAAATTGGTTACTGCCCAATCCAAATATA
AACTCTGTTGAACTGTGTGATGAATGATGATTTTCGTTGGTGCTGGCGTG
GTGATGGGATCCGGGGAATTGCATGTCCAGCCCGCAATTTAGTAAAATTT
TTATTCCTGAACAACTTCCTTTCCGGAAAAAGCAAGATTTTTCTGGCTGG
TGTTGCCAAAAAATTACTCCAGAAAAAGTTTTGGCCCCCATCCACCCGCC
TGGAGGGGGGAAGGGATGGGGCAACCTTGACCATGAATCAAAAGTGGCAG
TTCAAGAAAAACCCAATCCCAGTCCCCCTTTCCCCCCCTTTTAAGTACAA
ACTTTCCCTTGGGAATTTTCAAACCAAAATGACTCTCATTCCCCCTCACC
CCCGAAAAAAATGGAAATACAAGAATTTGCCCCCCGGTATAAAGGTAACC
CCCCATTATGACCAGGGGGTCCCACCAATTATTCTGGGGTATCCCTCTTT
TCCCCCCAAATAAAAAAAAAGATTGAAAAAAAAAAACCCCCTCTTTTTTT
TATGAATTAAAAAAAAAAAATTGATGAGAATAATAACAAAAAAAAAATGA
CGTGTG
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