EY710283

Overview
NameEY710283
Unique NameEY710283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.896e-13
Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 2
Query:  158 DWAFEEGPH--SDFAGPTSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-----HAGRVNGSLNLARAIGDMEFK 442
            D AF    H  +D +  TSG+TA VA++R+   L+VA+ GDSR ++ RKG+   L+ DH P+ + EKERI K GGF+         VNG L + R+IGD++ K
Sbjct:  168 DKAFASYAHLSADASLLTSGTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDEKERIKKFGGFVAWNSLGQPHVNGRLAMTRSIGDLDLK 270          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.896e-13
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  130 SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYK 208          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.896e-13
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   ++   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  130 SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYK 208          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.701e-13
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYK 208          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.701e-13
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYK 208          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.701e-13
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTAQSKYKLC 508
            GSTA VA++  + ++VAN GDSR V+ R G    LS DHKPD   E ERI  AGG   F    RV G L ++R+IGD   K   +++A     VT +S +  C
Sbjct:  192 GSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGARVLGVLAMSRSIGDAYLK--PYVTAVPEVTVTGRSDFDEC 292          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.701e-13
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQ 445
            GSTA  A++  NHL VAN GDSR VIS+ G+A  LS DHKP+   E++RI  AGG +  AG  RV G L ++RA G+   KQ
Sbjct:  321 GSTASTAVLVGNHLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGGVVMWAGTWRVGGVLAMSRAFGNRLLKQ 402          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.701e-13
Identity = 44/90 (48.89%), Postives = 56/90 (62.22%), Query Frame = 2
Query:  185 SDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQ 445
            SD +    GSTA  A++  + L VAN GDSR +I R G A  +S+DHKPD   E++RI  AGGF+  AG  RV G L ++RA GD   KQ
Sbjct:  110 SDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQ 199          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.314e-12
Identity = 45/89 (50.56%), Postives = 58/89 (65.17%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLARAIGDMEFKQNKFLSAE 466
            GSTA  A++  NHL VAN GDSR ++S+ G+A  LS DHKP+   E++RI  AGG I  AG  RV G L ++RA G+   KQ  F+ AE
Sbjct:  193 GSTASAAVLVGNHLYVANVGDSRTIVSKAGKAIALSDDHKPNRSDERKRIESAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQ--FVVAE 279          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.716e-12
Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGDMEFK 442
            GSTA VA++   H++VAN GDSR V+ R G A  LS DHKPD   E ERI  AGG   F    RV G L ++RAIGD   K
Sbjct:  191 GSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGDSYLK 271          
The following BLAST results are available for this feature:
BLAST of EY710283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PPM1K_MOUSE5.896e-1343.69Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]
PPM1B_RAT5.896e-1349.37Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PPM1B_MOUSE5.896e-1348.10Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PPM1B_HUMAN7.701e-1349.37Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
PPM1B_BOVIN7.701e-1349.37Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
P2C68_ORYSJ7.701e-1343.69Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C52_ORYSJ7.701e-1352.44Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C45_ORYSJ7.701e-1348.89Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C76_ARATH1.314e-1250.56Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C30_ORYSJ1.716e-1253.09Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710283 ID=EY710283; Name=EY710283; organism=Citrus sinensis; type=EST; length=1056bp
CGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAAGGGACAAAGAG
GATGGAGAGAATTAGCTGTTTTGGGAGATAAAATAAATAAATTCACTGGC
ATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGATAGTAATGATCA
ACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTGATTTTGCTGGAC
CAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGAAACAATCATCTC
ATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATCTAGAAAGGGCCA
GGCATATAATCTCTCAAGAGATCACAAACCAGATCTTGAAGCTGAGAAAG
AAAGGATATTGAAAGCTGGTGGATTTATACATGCAGGACGAGTCAATGGT
AGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATTCAAGCAGAACAA
ATTTTTGTCTGCTGAAAAAGCAAAATTGGTTACTGCCCAATCCAAATATA
AACTCTGTTGAACTGTGTGATGAATGATGATTTTCGTTGGTGCTGGCGTG
GTGATGGGATCCGGGGAATTGCATGTCCAGCCCGCAATTTAGTAAAATTT
TTATTCCTGAACAACTTCCTTTCCGGAAAAAGCAAGATTTTTCTGGCTGG
TGTTGCCAAAAAATTACTCCAGAAAAAGTTTTGGCCCCCATCCACCCGCC
TGGAGGGGGGAAGGGATGGGGCAACCTTGACCATGAATCAAAAGTGGCAG
TTCAAGAAAAACCCAATCCCAGTCCCCCTTTCCCCCCCTTTTAAGTACAA
ACTTTCCCTTGGGAATTTTCAAACCAAAATGACTCTCATTCCCCCTCACC
CCCGAAAAAAATGGAAATACAAGAATTTGCCCCCCGGTATAAAGGTAACC
CCCCATTATGACCAGGGGGTCCCACCAATTATTCTGGGGTATCCCTCTTT
TCCCCCCAAATAAAAAAAAAGATTGAAAAAAAAAAACCCCCTCTTTTTTT
TATGAATTAAAAAAAAAAAATTGATGAGAATAATAACAAAAAAAAAATGA
CGTGTG
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