EY710283

Overview
NameEY710283
Unique NameEY710283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.241e-12
Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  203 TSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTAQ 490
            T G+TA VA++R+   L+VA+ GDSR ++ R+G+ + L+ DH P+ + EK RI K+GGF+         VNG L + R+IGD++ K    ++  + K V  Q
Sbjct:  186 TCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQ 287          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.241e-12
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H    N GDSR ++ R  + Y  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYK 203          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.241e-12
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 2
Query:  203 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI---HAGRVNGSLNLARAIGDMEFKQNKFLSAE 466
            T GSTA VA++    ++VAN GDSR V+SR G A  LS DHKPD   E ER+  AGG +   +  RV G L  +R+IGD   K   F+SAE
Sbjct:  202 TVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLK--PFVSAE 290          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.991e-12
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 2
Query:  194 AGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI---HAGRVNGSLNLARAIGDMEFK 442
            A  T GSTA VA++ ++H++V+N GDSR V+ R  +A  LS DHKPD E E  RI  AGG +      RV G L ++R+IGD   K
Sbjct:  321 ASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLK 406          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.991e-12
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  203 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI---HAGRVNGSLNLARAIGD 430
            T GSTA VA++ ++H+IV+N GDSR V+ R   +  LS DHKPD E E  RI KAGG +      RV+G L ++R+IGD
Sbjct:  324 TVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGARVSGVLAMSRSIGD 402          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.991e-12
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTAQSK 496
            GSTA V++I    +IVAN GDSR V+ R G+A  LS DHKPD   E +RI +AGG   +    RV G L ++RAIGD   K   ++++E    VT +++
Sbjct:  233 GSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYLK--PYVTSEPEVTVTDRTE 329          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.519e-12
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 2
Query:  203 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 430
            +SG+TA  A+I    L+VANAGD R V+SR+G A  +S+DH+     E++RI   GG++  G +NG L + RA+GD
Sbjct:  153 SSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYVDDGYLNGQLAVTRALGD 228          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.514e-12
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYK 203          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.514e-12
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYK 203          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.514e-12
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYK 203          
The following BLAST results are available for this feature:
BLAST of EY710283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PPM1K_XENLA2.241e-1239.22Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
PPM1A_BOVIN2.241e-1246.84Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
P2C51_ORYSJ2.241e-1249.45Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C16_ARATH4.991e-1247.67Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C07_ARATH4.991e-1250.63Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C03_ARATH4.991e-1244.44Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C27_ORYSJ6.519e-1246.05Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
PPM1A_RAT8.514e-1245.57Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT8.514e-1245.57Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE8.514e-1245.57Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710283 ID=EY710283; Name=EY710283; organism=Citrus sinensis; type=EST; length=1056bp
CGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAAGGGACAAAGAG
GATGGAGAGAATTAGCTGTTTTGGGAGATAAAATAAATAAATTCACTGGC
ATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGATAGTAATGATCA
ACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTGATTTTGCTGGAC
CAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGAAACAATCATCTC
ATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATCTAGAAAGGGCCA
GGCATATAATCTCTCAAGAGATCACAAACCAGATCTTGAAGCTGAGAAAG
AAAGGATATTGAAAGCTGGTGGATTTATACATGCAGGACGAGTCAATGGT
AGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATTCAAGCAGAACAA
ATTTTTGTCTGCTGAAAAAGCAAAATTGGTTACTGCCCAATCCAAATATA
AACTCTGTTGAACTGTGTGATGAATGATGATTTTCGTTGGTGCTGGCGTG
GTGATGGGATCCGGGGAATTGCATGTCCAGCCCGCAATTTAGTAAAATTT
TTATTCCTGAACAACTTCCTTTCCGGAAAAAGCAAGATTTTTCTGGCTGG
TGTTGCCAAAAAATTACTCCAGAAAAAGTTTTGGCCCCCATCCACCCGCC
TGGAGGGGGGAAGGGATGGGGCAACCTTGACCATGAATCAAAAGTGGCAG
TTCAAGAAAAACCCAATCCCAGTCCCCCTTTCCCCCCCTTTTAAGTACAA
ACTTTCCCTTGGGAATTTTCAAACCAAAATGACTCTCATTCCCCCTCACC
CCCGAAAAAAATGGAAATACAAGAATTTGCCCCCCGGTATAAAGGTAACC
CCCCATTATGACCAGGGGGTCCCACCAATTATTCTGGGGTATCCCTCTTT
TCCCCCCAAATAAAAAAAAAGATTGAAAAAAAAAAACCCCCTCTTTTTTT
TATGAATTAAAAAAAAAAAATTGATGAGAATAATAACAAAAAAAAAATGA
CGTGTG
back to top