EY710283

Overview
NameEY710283
Unique NameEY710283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.514e-12
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 2
Query:  206 SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFK 442
            SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD ++K
Sbjct:  125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYK 203          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PP2C4_YEAST (Protein phosphatase 2C homolog 4 OS=Saccharomyces cerevisiae GN=PTC4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.514e-12
Identity = 45/105 (42.86%), Postives = 56/105 (53.33%), Query Frame = 2
Query:  170 EEGPHSDFAGPTSGSTACVA-IIRNNHLIVANAGDSRCVISRKGQAYN-LSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKL 478
            +E  +  FA  + GSTA VA II    L VAN GDSRC++S K      +S DHKP    E  RI   GG +  GRV G L L+RA  D +FK+       + KL
Sbjct:  164 DEELYRHFANSSCGSTAVVACIINEESLYVANCGDSRCILSSKSNGIKTMSFDHKPQHIGELIRINDNGGTVSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKL 268          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.514e-12
Identity = 46/101 (45.54%), Postives = 58/101 (57.43%), Query Frame = 2
Query:  149 QPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG-FIHAG--RVNGSLNLARAIGDMEFK 442
            Q  D  F E   + F     GSTA  A++   HL VAN GDSR V+S+ G+A  LS DHKP+   E++RI  AGG  I AG  RV G L ++RA G+   K
Sbjct:  185 QKTDTDFLESESNAFRD--DGSTASTAVLVGGHLYVANVGDSRAVVSKAGKAMALSEDHKPNRSDERKRIENAGGVVIWAGTWRVGGVLAMSRAFGNRLLK 283          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11
Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTAQSKYKLC 508
            GSTA VA++  N ++VAN+GDSR V+ R G    LS DHKPD   E ERI  AGG   +    RV G L ++RAIGD   K   ++++E    VT ++    C
Sbjct:  213 GSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYLK--PYVTSEPEVTVTERADDDEC 313          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVT 484
            G+TA  A++   HL+VAN GD R V+ RKG+A ++S DHK   E E+ R+   GG+     + G L + RA+GD   K+   L    + L++
Sbjct:  229 GTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGGYFEGEYLYGDLAVTRALGDWSIKRFSPLGESLSPLIS 320          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11
Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  185 SDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI---HAGRVNGSLNLARAIGDMEFK 442
            +D    T GSTA VA++    ++VAN GDSR V+SR G A  LS DHKPD   E ER+  AGG +   +  R+ G L  +R+IGD   K
Sbjct:  211 ADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYLK 299          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI---HAGRVNGSLNLARAIGDMEFKQNKFLSAE 466
            GSTA  AI   NH+ VAN GDSR V+S+ G+A  LS DHKP+ + E++RI  AGG +      RV G L ++RA G+   K  +F+ AE
Sbjct:  207 GSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGGVVTWSGTWRVGGVLAMSRAFGNRFLK--RFVVAE 293          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.452e-11
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 2
Query:  197 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQ 445
            G   GSTA   ++    L +A+ GDSR ++SR G     + DH+P    E+ERI  AGG +   RV GSL ++RA+GD  +KQ
Sbjct:  151 GDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTVRRRRVEGSLAVSRALGDFAYKQ 233          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.452e-11
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  203 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK 451
            +SG+TA  A+I    L++ANAGD R V+SR G A  +S DH+P   +EK R+   GG++  G +NG L + RA+GD   +  K
Sbjct:  159 SSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYVDDGYLNGLLGVTRALGDWHLEGMK 241          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.452e-11
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 2
Query:  209 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-HAGRVNGSLNLARAIGDMEFK-----QNKFLSAEKAKLVT 484
            G+TA  A+I    L+VANAGD R V+ RKG+A ++S DHKP    E+ R+ ++GGFI + G +N  L + RA+GD + K     Q+  +S  + K +T
Sbjct:  187 GTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDGYLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQIT 284          
The following BLAST results are available for this feature:
BLAST of EY710283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PPM1A_HUMAN8.514e-1245.57Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PP2C4_YEAST8.514e-1242.86Protein phosphatase 2C homolog 4 OS=Saccharomyces ... [more]
P2C13_ORYSJ8.514e-1245.54Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C49_ORYSJ1.112e-1143.69Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C43_ARATH1.112e-1138.04Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C08_ORYSJ1.112e-1146.07Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
P2C07_ORYSJ1.112e-1147.19Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
PPMBL_MOUSE1.452e-1142.17Probable protein phosphatase 1B-like OS=Mus muscul... [more]
P2C54_ORYSJ1.452e-1143.37Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C49_ARATH1.452e-1141.84Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710283 ID=EY710283; Name=EY710283; organism=Citrus sinensis; type=EST; length=1056bp
CGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAAGGGACAAAGAG
GATGGAGAGAATTAGCTGTTTTGGGAGATAAAATAAATAAATTCACTGGC
ATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGATAGTAATGATCA
ACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTGATTTTGCTGGAC
CAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGAAACAATCATCTC
ATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATCTAGAAAGGGCCA
GGCATATAATCTCTCAAGAGATCACAAACCAGATCTTGAAGCTGAGAAAG
AAAGGATATTGAAAGCTGGTGGATTTATACATGCAGGACGAGTCAATGGT
AGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATTCAAGCAGAACAA
ATTTTTGTCTGCTGAAAAAGCAAAATTGGTTACTGCCCAATCCAAATATA
AACTCTGTTGAACTGTGTGATGAATGATGATTTTCGTTGGTGCTGGCGTG
GTGATGGGATCCGGGGAATTGCATGTCCAGCCCGCAATTTAGTAAAATTT
TTATTCCTGAACAACTTCCTTTCCGGAAAAAGCAAGATTTTTCTGGCTGG
TGTTGCCAAAAAATTACTCCAGAAAAAGTTTTGGCCCCCATCCACCCGCC
TGGAGGGGGGAAGGGATGGGGCAACCTTGACCATGAATCAAAAGTGGCAG
TTCAAGAAAAACCCAATCCCAGTCCCCCTTTCCCCCCCTTTTAAGTACAA
ACTTTCCCTTGGGAATTTTCAAACCAAAATGACTCTCATTCCCCCTCACC
CCCGAAAAAAATGGAAATACAAGAATTTGCCCCCCGGTATAAAGGTAACC
CCCCATTATGACCAGGGGGTCCCACCAATTATTCTGGGGTATCCCTCTTT
TCCCCCCAAATAAAAAAAAAGATTGAAAAAAAAAAACCCCCTCTTTTTTT
TATGAATTAAAAAAAAAAAATTGATGAGAATAATAACAAAAAAAAAATGA
CGTGTG
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