EY710281

Overview
NameEY710281
Unique NameEY710281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.731e-64
Identity = 114/152 (75.00%), Postives = 128/152 (84.21%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVL  +EGV GT+ F Q  DGPTTV+G +SGLKPG HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDD RHA              +F+++D+QIPL+GPNSI+GRAVVVHADPDDLGKGGHEL+K+TGNAGGRVACG+IGLQG
Sbjct:    1 MVKAVAVLSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGLQG 152
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 2.261e-64
Identity = 116/152 (76.32%), Postives = 129/152 (84.87%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVL  +EGV GT+ F Q+GD PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHGAPED+ RHA            TA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHEL+K+TGNAGGRVACGIIGLQG
Sbjct:    1 MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.857e-64
Identity = 115/152 (75.66%), Postives = 128/152 (84.21%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVL  +E V GT+ F+Q+GD PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHGAPED+NRHA            TA+FT+ D QIPL+GP SIIGR VVVHADPDDLGKGGHEL K+TGNAGGRVACGIIGLQG
Sbjct:    1 MVKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGGHELTKTTGNAGGRVACGIIGLQG 152
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3)

HSP 1 Score: 244.973 bits (624), Expect = 5.038e-64
Identity = 115/152 (75.66%), Postives = 128/152 (84.21%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVL  +EGV GT+ F Q+G  PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHGAPED+ RHA            TA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHEL+KSTGNAGGR+ACGIIGLQG
Sbjct:    1 MVKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 6.579e-64
Identity = 116/152 (76.32%), Postives = 129/152 (84.87%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVL  +EGVKGT+ F+QEGDGPT+V+GS+SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GKEHGAP+D+NRHA             A   V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHEL+K+TGNAGGRVACGIIGLQG
Sbjct:    1 MVKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 6.579e-64
Identity = 117/152 (76.97%), Postives = 129/152 (84.87%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVL GT+ VKGT+ F+QEGDGPTTV+GS+SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GKEHGAPED++RHA                 + D+QIPL+GP+SIIGRAVVVHADPDDLGKGGHEL+KSTGNAGGRVACGIIGLQG
Sbjct:    1 MVKAVAVLAGTD-VKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 151
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 2.500e-63
Identity = 116/152 (76.32%), Postives = 125/152 (82.24%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            M K VAVL  +EGV GT+ F QEGDG TTVSG++SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GK HGAPED NRHA            TATFT+ D QIPL+GPNSI+GRAVVVHADPDDLGKGGHEL+ +TGNAGGRVACGIIGLQG
Sbjct:    1 MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGLQG 152
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 4.265e-63
Identity = 114/152 (75.00%), Postives = 128/152 (84.21%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVLG +EGV GT+ F QEG+GPTTV+GSL+GLKPG HGFHVHALGDTTNGC+STG HFNP   EHGAPED+NRHA            T +F++ D+QIPL+GPNSIIGRAVVVHAD DDLGKGGHEL+K+TGNAGGRVACGIIGLQG
Sbjct:    1 MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 5.570e-63
Identity = 111/152 (73.03%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            ++KAV VL G   VKG V F QEGDGPTTV+G +SGL PG HGFHVHALGDTTNGCMSTGPHFNP GKEHGAP DDNRHA            T  F++ D+QIPLSGP+SI+GRAVVVHADPDDLGKGGHEL+KSTGNAGGR+ACG++GLQG
Sbjct:    3 LLKAVVVLNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGVVGLQG 154
[Close]
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 5.570e-63
Identity = 115/152 (75.66%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGLQG 546
            MVKAVAVL  +EGV GT  F Q G  PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHGAPED+ RHA            TA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHEL+KSTGNAGGR+ACGIIGLQG
Sbjct:    1 MVKAVAVLNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152
The following BLAST results are available for this feature:
BLAST of EY710281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
SODC_CARPA1.731e-6475.00Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=S... [more]
SODC_NICPL2.261e-6476.32Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbagi... [more]
SODC_CAPAN3.857e-6475.66Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN... [more]
SODC2_SOLLC5.038e-6475.66Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopers... [more]
SODC2_ORYSJ6.579e-6476.32Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa sub... [more]
SODC2_MAIZE6.579e-6476.97Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODC... [more]
SODC_ARATH2.500e-6376.32Superoxide dismutase [Cu-Zn] OS=Arabidopsis thalia... [more]
SODC_SOYBN4.265e-6375.00Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD... [more]
SODC_PINSY5.570e-6373.03Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris G... [more]
SODC1_SOLLC5.570e-6375.66Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopers... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710281 ID=EY710281; Name=EY710281; organism=Citrus sinensis; type=EST; length=975bp
ACACTCTCTCTCTCTCTCACTCCCTCTTTCTCTCTACAAGCCCTCTTCAT
TTTCCTCCCTCCAAGGGGTGTTCTGAGATCACACAGCACAATGGTGAAAG
CAGTTGCAGTTCTTGGTGGAACTGAGGGTGTCAAGGGAACTGTTTCCTTT
GCCCAGGAAGGAGATGGTCCAACAACTGTATCAGGAAGCCTCTCTGGTCT
CAAGCCTGGTCCTCATGGATTCCATGTTCATGCTCTTGGAGACACAACAA
ATGGTTGCATGTCTACTGGACCCCACTTTAACCCTGCTGGAAAAGAACAT
GGAGCTCCAGAGGATGATAATCGTCATGCTGGTGATTTAGGAAATGTCAA
TGTTGGTGATGATGGTACTGCTACTTTTACAGTTGTTGACAATCAGATTC
CACTTTCTGGACCAAATTCCATTATTGGAAGGGCTGTTGTAGTCCACGCA
GATCCCGATGATCTTGGCAAGGGCGGTCATGAGCTGAACAAAAGCACTGG
AAATGCTGGTGGCAGAGTAGCTTGCGGCATCATTGGCCTCCAAGGGTGAA
GCCTTATCTCATCGGACAATAATAAATTCATTTGATATGGATGTTTTGAG
TGCATTATAGTCCATATATGCTTGAGTGTGACTTTTCAGAATATGATTCT
TGAAAAAAAAAAATCAATAACTTTGTTGGGGAACCTTGGAAGGTTTTTCT
TAAAATCCCCCTCCTTTAATTTTCATTTTTAATTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGGGGGGGCCCCCTCTCAAGAGAATCCAAACCTTAAC
AACCCCGGGGGCAGGGCAAAGTTCCAAAACTTCTTTTTATAAGGGGCCCC
CCAAAAATTTTAATTTTACCGGGGGGCCCCCCCCTTTTTTAAACACCCCC
CCCGGGGAGAGGGGGGAAAAAAAACCCCCGGGGGGGGTTTTACCCCCCCA
CACTTTTTAATATCTCCCCCCCTTT
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