EY710281

Overview
NameEY710281
Unique NameEY710281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 3.185e-34
Identity = 73/152 (48.03%), Postives = 90/152 (59.21%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            MVKAV V+ G   V G++ F QE +  PT ++  +SG       G H+H  GD TNGC S GPHFNP  K HGAPED NRH              +  TV D+ + L GP S+IGR +VVH   DDLGKG +E +  TGNAG R ACG+IG+
Sbjct:    1 MVKAVCVVRGDSKVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.266e-34
Identity = 76/152 (50.00%), Postives = 88/152 (57.89%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEG-DGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            MV AVAVL G   V G V F QE  D  T +S  ++G       GFH+H  GD TNGC S GPHFNP  K HGAPED+ RH              +  ++ D  I L GP SI+GR VVVHA  DDLGKGG   +  TGNAG R ACG+IG+
Sbjct:    1 MVNAVAVLKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHACGVIGI 152          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.581e-33
Identity = 79/165 (47.88%), Postives = 96/165 (58.18%), Query Frame = 1
Query:   76 RSHSTMV------KAVAVLGGTEGVKGTVSFAQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGG---HELNKSTGNAGGRVACGIIGL 540
            RSHS  +      +AVAVL G  GV G + F Q   G  TT+SGS+SGL PG HGFHVH  GD TNGC S G H+NP GK HG P D  +H              A   +    I L GP S+IG ++VVHA+ DDLG+G     E +  TGNAG R+ACG+IG+
Sbjct:   33 RSHSNGMHGNGARRAVAVLRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLGQGTGNMREESLKTGNAGSRLACGVIGI 197          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_PAESI (Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinensis GN=SOD1 PE=3 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 2.696e-33
Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKP-GPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            MVKAV VL G   + G V+F QE D  PTT+S  +S        GFH+   GD TNGC S GPHFNP GK HG   D+NRH              +  ++ D  I L GP+S+IGR VV+HA  DDLGKGG++ +  TGNAG R ACG+IG+
Sbjct:    1 MVKAVCVLRGDSKITGIVNFEQESDSSPTTISWEISNHDADAKRGFHITPFGDNTNGCTSAGPHFNPHGKTHGNVTDENRHVGDMGNIETDCDGNSKGSIKDKLIKLIGPHSVIGRTVVIHAGTDDLGKGGNDESLKTGNAGPRPACGVIGV 152          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODE_HAECO (Extracellular superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.521e-33
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 1
Query:  106 AVLGGTEG-VKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            AV GG      G +   Q G     ++GS+SGL+PG HGFH+H  GD  NGC++ G HFNP    HGAPED NRH                  + D+ I L+G +++IGRA+V+HAD DDLG+G  EL+K+TGNAG RVACG+IG+
Sbjct:   38 AVKGGNPAKTVGIIDLVQTGT-LVKMNGSVSGLQPGLHGFHIHEKGDLGNGCLAAGAHFNPHKMMHGAPEDSNRHVGDLGNIETPKTGDTPILISDSVISLTGQHNVIGRAIVIHADMDDLGRGTSELSKTTGNAGARVACGVIGI 182          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CAEEL (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-1 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.599e-33
Identity = 73/152 (48.03%), Postives = 92/152 (60.53%), Query Frame = 1
Query:   97 KAVAVLGGTEGVKGTVSFAQEGDGPTTV-SGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELNKSTGNAGGRVACGIIGL 540
            +AVAVL G E V GT+   Q+ +    V  G + GL PG HGFHVH  GD+TNGC+S GPHFNP GK HG P+ + RH              A   + D  + L GPN+++GR++VVHA  DDLG+G     E +K TGNAG R ACG+I L
Sbjct:   26 RAVAVLRG-ETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIAL 176          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.338e-32
Identity = 73/152 (48.03%), Postives = 91/152 (59.87%), Query Frame = 1
Query:   97 KAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG-GHELNKS--TGNAGGRVACGIIGL 540
            +AVAVL G + V GT+   Q  +  P  + G + GL PG HGFHVH  GD+TNGC+S GPHFNP GK HG P  + RH              A   + D  I L G N++IGR++VVHA  DDLG+G G +  +S  TGNAG R ACG+I L
Sbjct:   26 RAVAVLRG-DVVSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAGQDDLGQGVGDKAEESAKTGNAGARAACGVIAL 176          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC4_DICDI (Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum GN=sodD PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.981e-32
Identity = 76/150 (50.67%), Postives = 94/150 (62.67%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRH-AXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGII 534
            MVKA+ V+ G   V GT+ F+QE +G P  V+G++SGL  G HGFH+H  GDT+NGC+S G HFNP   EHG P    RH               A   + DN I L G  SIIGR +VVH + DDLG GG+ L+K+TGNAG RVACGI+
Sbjct:    1 MVKAICVVKGAV-VNGTIIFSQENEGSPVYVNGTISGLSGGLHGFHIHEFGDTSNGCLSAGAHFNPFHVEHGGPNSAIRHVGDLGNITSCPSSKVANVLIQDNVISLFGDLSIIGRTLVVHENQDDLGLGGN-LSKTTGNAGARVACGIL 148          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_NPVAC (Putative superoxide dismutase [Cu-Zn] OS=Autographa californica nuclear polyhedrosis virus GN=SOD PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.523e-31
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KA+ ++ G   V G + F QE  + P  +SG L  L  G HGFHVH  GDT+NGC S G HFNP  ++HGAP+ + RH             + T   ++DN + L GP++IIGR++VVH D DDLG   H L+K+TGN+GGR+ CGII +
Sbjct:    1 MKAICIISGD--VHGKIYFQQESANQPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSAGYNSLTEVNMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTDHPLSKTTGNSGGRLGCGIIAI 149          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODE_CAEEL (Extracellular superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-4 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 5.622e-31
Identity = 72/156 (46.15%), Postives = 94/156 (60.26%), Query Frame = 1
Query:   70 VLRSHSTMVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIG 537
            V+R+ + + KA A    TE + GT+ F Q G     ++GS+SGL  G HGFH+H  GDT NGC+S G H+NP    HGAP+D NRH                 +V D+   LSG  SIIGR+VV+H   DDLG+G  + +K+TGNAG R+ACG IG
Sbjct:   21 VIRARAYIFKAEAGKIPTELI-GTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174          
The following BLAST results are available for this feature:
BLAST of EY710281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
SODC_COLGL3.185e-3448.03Superoxide dismutase [Cu-Zn] OS=Colletotrichum glo... [more]
SODC_KLULA9.266e-3450.00Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lact... [more]
SODE_ONCVO1.581e-3347.88Extracellular superoxide dismutase [Cu-Zn] OS=Onch... [more]
SODC_PAESI2.696e-3348.68Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinen... [more]
SODE_HAECO3.521e-3347.95Extracellular superoxide dismutase [Cu-Zn] OS=Haem... [more]
SODC_CAEEL4.599e-3348.03Superoxide dismutase [Cu-Zn] OS=Caenorhabditis ele... [more]
SODC_CAEBR1.338e-3248.03Superoxide dismutase [Cu-Zn] OS=Caenorhabditis bri... [more]
SODC4_DICDI2.981e-3250.67Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium di... [more]
SODC_NPVAC2.523e-3145.70Putative superoxide dismutase [Cu-Zn] OS=Autograph... [more]
SODE_CAEEL5.622e-3146.15Extracellular superoxide dismutase [Cu-Zn] OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710281 ID=EY710281; Name=EY710281; organism=Citrus sinensis; type=EST; length=975bp
ACACTCTCTCTCTCTCTCACTCCCTCTTTCTCTCTACAAGCCCTCTTCAT
TTTCCTCCCTCCAAGGGGTGTTCTGAGATCACACAGCACAATGGTGAAAG
CAGTTGCAGTTCTTGGTGGAACTGAGGGTGTCAAGGGAACTGTTTCCTTT
GCCCAGGAAGGAGATGGTCCAACAACTGTATCAGGAAGCCTCTCTGGTCT
CAAGCCTGGTCCTCATGGATTCCATGTTCATGCTCTTGGAGACACAACAA
ATGGTTGCATGTCTACTGGACCCCACTTTAACCCTGCTGGAAAAGAACAT
GGAGCTCCAGAGGATGATAATCGTCATGCTGGTGATTTAGGAAATGTCAA
TGTTGGTGATGATGGTACTGCTACTTTTACAGTTGTTGACAATCAGATTC
CACTTTCTGGACCAAATTCCATTATTGGAAGGGCTGTTGTAGTCCACGCA
GATCCCGATGATCTTGGCAAGGGCGGTCATGAGCTGAACAAAAGCACTGG
AAATGCTGGTGGCAGAGTAGCTTGCGGCATCATTGGCCTCCAAGGGTGAA
GCCTTATCTCATCGGACAATAATAAATTCATTTGATATGGATGTTTTGAG
TGCATTATAGTCCATATATGCTTGAGTGTGACTTTTCAGAATATGATTCT
TGAAAAAAAAAAATCAATAACTTTGTTGGGGAACCTTGGAAGGTTTTTCT
TAAAATCCCCCTCCTTTAATTTTCATTTTTAATTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGGGGGGGCCCCCTCTCAAGAGAATCCAAACCTTAAC
AACCCCGGGGGCAGGGCAAAGTTCCAAAACTTCTTTTTATAAGGGGCCCC
CCAAAAATTTTAATTTTACCGGGGGGCCCCCCCCTTTTTTAAACACCCCC
CCCGGGGAGAGGGGGGAAAAAAAACCCCCGGGGGGGGTTTTACCCCCCCA
CACTTTTTAATATCTCCCCCCCTTT
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