EY710281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODE_MOUSE (Extracellular superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod3 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.671e-16 Identity = 50/141 (35.46%), Postives = 69/141 (48.94%), Query Frame = 1 Query: 130 VKGTVSFAQEGDGPT-----TVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIG 537 + G V F Q G G ++ G + HVH GD + GC STGPH+NP H D + T + L+GP++I+GR+VVVHA DDLGKGG++ + GNAG R+AC ++G Sbjct: 92 ITGLVLFRQLGPGSRLEAYFSLEGFPAEQNASNRAIHVHEFGDLSQGCDSTGPHYNPMEVPHPQHPGDFGNFVVRNGQLWRHRVGLTAS-------LAGPHAILGRSVVVHAGEDDLGKGGNQASLQNGNAGRRLACCVVG 225
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODCP_POPTM (Superoxide dismutase [Cu-Zn], chloroplastic OS=Populus tremuloides GN=SODCP PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 9.017e-13 Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 1 Query: 412 PNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540 PNS++GRA+VVH DDLGKGGHEL+ STGNAGGR+ACG++GL Sbjct: 156 PNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGL 198
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DEIRA (Superoxide dismutase [Cu-Zn] OS=Deinococcus radiodurans GN=sodC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.623e-12 Identity = 49/153 (32.03%), Postives = 72/153 (47.06%), Query Frame = 1 Query: 109 VLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNG---------CMSTGPHFNP-AGKEHGAPE--DDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGI 531 +L T V GT +F+ G T VS +SGLK GPHG H+H + G + G HF+P A H P +D H N++ ++GP ++GR++V+HAD DD ++ N + GN+GGR CG+ Sbjct: 32 LLDQTGKVTGTATFSPSPIG-TRVSIEVSGLKAGPHGLHIHENPNCNPGPDAQGQTIPFGAAGGHFDPGASHNHDGPHARNDQGHGGDLPMITVGEDGKGRLNFDTNRLKMTGPTGVLGRSIVIHADADD-----YQTNPA-GNSGGRERCGV 177 The following BLAST results are available for this feature:
BLAST of EY710281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710281 ID=EY710281; Name=EY710281; organism=Citrus sinensis; type=EST; length=975bpback to top |