EY710281

Overview
NameEY710281
Unique NameEY710281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DROSI (Superoxide dismutase [Cu-Zn] OS=Drosophila simulans GN=Sod PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 7.563e-44
Identity = 88/151 (58.28%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +VKAV V+ G    KGTV F QE  G P  VSG + GL  G HGFHVH  GD TNGCMS+GPHFNP GKEHGAP D+NRH                  + D++I L G +SIIGR VVVHAD DDLG+GGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DROSE (Superoxide dismutase [Cu-Zn] OS=Drosophila sechellia GN=Sod PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 7.563e-44
Identity = 88/151 (58.28%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +VKAV V+ G    KGTV F QE  G P  VSG + GL  G HGFHVH  GD TNGCMS+GPHFNP GKEHGAP D+NRH                  + D++I L G +SIIGR VVVHAD DDLG+GGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DROME (Superoxide dismutase [Cu-Zn] OS=Drosophila melanogaster GN=Sod PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 7.563e-44
Identity = 88/151 (58.28%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +VKAV V+ G    KGTV F QE  G P  VSG + GL  G HGFHVH  GD TNGCMS+GPHFNP GKEHGAP D+NRH                  + D++I L G +SIIGR VVVHAD DDLG+GGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DROMA (Superoxide dismutase [Cu-Zn] OS=Drosophila mauritiana GN=Sod PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 7.563e-44
Identity = 88/151 (58.28%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +VKAV V+ G    KGTV F QE  G P  VSG + GL  G HGFHVH  GD TNGCMS+GPHFNP GKEHGAP D+NRH                  + D++I L G +SIIGR VVVHAD DDLG+GGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DROYA (Superoxide dismutase [Cu-Zn] OS=Drosophila yakuba GN=Sod PE=3 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 9.877e-44
Identity = 88/151 (58.28%), Postives = 103/151 (68.21%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +VKAV V+ G    KGTV F QE  + P  VSG + GL  G HGFHVH  GD TNGCMS+GPHFNP GKEHGAP D+NRH                 ++ D++I L G +SIIGR VVVHAD DDLGKGGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DROOR (Superoxide dismutase [Cu-Zn] OS=Drosophila orena GN=Sod PE=3 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 9.877e-44
Identity = 88/151 (58.28%), Postives = 103/151 (68.21%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +VKAV V+ G    KGTV F QE  + P  VSG + GL  G HGFHVH  GD TNGCMS+GPHFNP GKEHGAP D+NRH                 ++ D++I L G +SIIGR VVVHAD DDLGKGGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSRITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.290e-43
Identity = 86/150 (57.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KAV V+ GT GVKG V F QE D GP  V    SGLK G HGFHVH  GDTTNGC S G HFNP  +EHGAPED  RH              A +   D  I L+G +SIIGR +V+H + DDLG+GGHEL+K TGNAGGR+ACG+IGL
Sbjct:    1 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGL 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CHYAM (Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 2.200e-43
Identity = 86/151 (56.95%), Postives = 100/151 (66.23%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            + KAV V+ G    KGTV F QE    P  V G ++GL  G HGFHVH  GD TNGCMS+GPHFNP  KEHGAP D+NRH                  + D++I L G NSI+GR VVVHADPDDLGKGGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VAKAVCVINGD--AKGTVYFEQEDACAPVKVCGEITGLNKGQHGFHVHEFGDNTNGCMSSGPHFNPLNKEHGAPTDENRHLGDLGNIEAPGDGPTKVCINDSKITLFGENSIVGRTVVVHADPDDLGKGGHELSKSTGNAGARIGCGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.874e-43
Identity = 83/149 (55.70%), Postives = 98/149 (65.77%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KAV VL GT  V GTV F Q  DGP T+ GS++GL PG HGFHVHA GD TNGC+S GPH+NP  K HG P+D+ RH              A F + D Q+ LSG  SIIGR +VVH   DDLGKGG E +  TGNAG R+ACG+IG+
Sbjct:    1 MKAVCVLKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLACGVIGI 149          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_DROTE (Superoxide dismutase [Cu-Zn] OS=Drosophila teissieri GN=Sod PE=3 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 2.874e-43
Identity = 87/151 (57.62%), Postives = 103/151 (68.21%), Query Frame = 1
Query:   91 MVKAVAVLGGTEGVKGTVSFAQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +VKAV V+ G    KGTV F QE  + P  VSG + GL  G HGFHVH  GD TNGCMS+GPHFNP GKEHGAP D+NRH                 ++ D++I L G +SIIGR VVVHAD DDLG+GGHEL+KSTGNAG R+ CG+IG+
Sbjct:    2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150          
The following BLAST results are available for this feature:
BLAST of EY710281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
SODC_DROSI7.563e-4458.28Superoxide dismutase [Cu-Zn] OS=Drosophila simulan... [more]
SODC_DROSE7.563e-4458.28Superoxide dismutase [Cu-Zn] OS=Drosophila sechell... [more]
SODC_DROME7.563e-4458.28Superoxide dismutase [Cu-Zn] OS=Drosophila melanog... [more]
SODC_DROMA7.563e-4458.28Superoxide dismutase [Cu-Zn] OS=Drosophila mauriti... [more]
SODC_DROYA9.877e-4458.28Superoxide dismutase [Cu-Zn] OS=Drosophila yakuba ... [more]
SODC_DROOR9.877e-4458.28Superoxide dismutase [Cu-Zn] OS=Drosophila orena G... [more]
SODC_SCHMA1.290e-4357.33Superoxide dismutase [Cu-Zn] OS=Schistosoma manson... [more]
SODC_CHYAM2.200e-4356.95Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena G... [more]
SODC_PRIGL2.874e-4355.70Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN... [more]
SODC_DROTE2.874e-4357.62Superoxide dismutase [Cu-Zn] OS=Drosophila teissie... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710281 ID=EY710281; Name=EY710281; organism=Citrus sinensis; type=EST; length=975bp
ACACTCTCTCTCTCTCTCACTCCCTCTTTCTCTCTACAAGCCCTCTTCAT
TTTCCTCCCTCCAAGGGGTGTTCTGAGATCACACAGCACAATGGTGAAAG
CAGTTGCAGTTCTTGGTGGAACTGAGGGTGTCAAGGGAACTGTTTCCTTT
GCCCAGGAAGGAGATGGTCCAACAACTGTATCAGGAAGCCTCTCTGGTCT
CAAGCCTGGTCCTCATGGATTCCATGTTCATGCTCTTGGAGACACAACAA
ATGGTTGCATGTCTACTGGACCCCACTTTAACCCTGCTGGAAAAGAACAT
GGAGCTCCAGAGGATGATAATCGTCATGCTGGTGATTTAGGAAATGTCAA
TGTTGGTGATGATGGTACTGCTACTTTTACAGTTGTTGACAATCAGATTC
CACTTTCTGGACCAAATTCCATTATTGGAAGGGCTGTTGTAGTCCACGCA
GATCCCGATGATCTTGGCAAGGGCGGTCATGAGCTGAACAAAAGCACTGG
AAATGCTGGTGGCAGAGTAGCTTGCGGCATCATTGGCCTCCAAGGGTGAA
GCCTTATCTCATCGGACAATAATAAATTCATTTGATATGGATGTTTTGAG
TGCATTATAGTCCATATATGCTTGAGTGTGACTTTTCAGAATATGATTCT
TGAAAAAAAAAAATCAATAACTTTGTTGGGGAACCTTGGAAGGTTTTTCT
TAAAATCCCCCTCCTTTAATTTTCATTTTTAATTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGGGGGGGCCCCCTCTCAAGAGAATCCAAACCTTAAC
AACCCCGGGGGCAGGGCAAAGTTCCAAAACTTCTTTTTATAAGGGGCCCC
CCAAAAATTTTAATTTTACCGGGGGGCCCCCCCCTTTTTTAAACACCCCC
CCCGGGGAGAGGGGGGAAAAAAAACCCCCGGGGGGGGTTTTACCCCCCCA
CACTTTTTAATATCTCCCCCCCTTT
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